myRT

myRT report for GCA_003225635.1_ASM322563v1

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Seq: QIAT01000105.1 Acidobacteria bacterium isolate gp1 AA122 14_0903_09_20cm_scaffold_1238_curated, whole genome shotgun sequence (15746 bp)
Overview 1 RT 1: 9975-11760 bp Neighborhood of RT #1 [9975, 11867] G3P_antiterm RVT-GII Phage_integrase Feature: gene Location: 9975-10145 bp Feature: gene Location: 10147-10656 bp Feature: domain Description: G3P_antiterm Location: 10492-10621 bp Feature: domain Description: G3P_antiterm Location: 1 0492-1 0621 bp Feature: gene Location: 10762-11073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10879-10993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0879-1 0993 bp Feature: gene Location: 11335-11493 bp Feature: gene Location: 11670-11867 bp Feature: domain Description: Phage_integrase Location: 11673-11760 bp Feature: domain Description: Phage_integrase Location: 1 1 673-1 1 760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT G3P_antiterm (pfam04309), RVT-GII, Phage_integrase (pfam00589)

Seq: QIAT01000106.1 Acidobacteria bacterium isolate gp1 AA122 14_0903_09_20cm_scaffold_1254_curated, whole genome shotgun sequence (7809 bp)
Overview 1 RT 1: 775-6699 bp Neighborhood of RT #1 [775, 7097] PRK08628 RVT-GII DUF2961 DUF4185 Feature: gene Location: 775-1350 bp Feature: domain Description: PRK08628 Location: 898-1345 bp Feature: domain Description: PRK0862 8 Location: 898-1345 bp Feature: gene Location: 1792-1959 bp Feature: gene Location: 2750-4060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3005-3692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3005-3692 bp Feature: gene Location: 4198-5328 bp Feature: domain Description: DUF2961 Location: 4459-5224 bp Feature: domain Description: DUF2 961 Location: 4459-52 2 4 bp Feature: gene Location: 5496-7097 bp Feature: domain Description: DUF4185 Location: 5931-6699 bp Feature: domain Description: DUF4185 Location: 5931-6699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF2961 (pfam11175), DUF4185 (pfam13810), PRK08628 (SDR family oxidoreductase)

Seq: QIAT01000294.1 Acidobacteria bacterium isolate gp1 AA122 14_0903_09_20cm_scaffold_288_curated, whole genome shotgun sequence (99398 bp)
Overview 1 RT 1: 95724-99384 bp Neighborhood of RT #1 [95724, 99384] FolA RVT-GII GIIM HNH RVT_N RVT-GII Feature: gene Location: 95724-96278 bp Feature: domain Description: FolA Location: 95736-96261 bp Feature: domain Description: FolA Location: 9573 6-96261 bp Feature: gene Location: 96521-96976 bp Feature: gene Location: 97092-98204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97095-97473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97095-97473 bp Feature: domain Description: GIIM Note: maturase Location: 97527-97761 bp Feature: domain Description: GIIM Note: maturase Location: 97527-97761 bp Feature: domain Description: HNH Note: nucleases Location: 98013-98151 bp Feature: domain Description: HNH Note: nucleases Location: 98013 -98151 bp Feature: gene Location: 98314-98823 bp Feature: RT Description: RVT_N Location: 98365-98608 bp Feature: RT Description: RVT_N Location: 983 65-98608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98653-98782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98653 -98782 bp Feature: gene Location: 99112-99384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FolA (COG0262), RVT-GII, GIIM (pfam08388), HNH (pfam01844), RVT_N (pfam13655)

Seq: QIAT01000166.1 Acidobacteria bacterium isolate gp1 AA122 14_0903_09_20cm_scaffold_7033_curated, whole genome shotgun sequence (3776 bp)
Overview 1 RT 1: 1078-3627 bp Neighborhood of RT #1 [1078, 3773] COG3547 RVT-GII GIIM Feature: gene Location: 1078-2316 bp Feature: domain Description: COG3547 Location: 1102-2164 bp Feature: domain Description: COG354 7 Location: 1102-2164 bp Feature: gene Location: 2334-2471 bp Feature: gene Location: 2613-3773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2727-3348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2727-334 8 bp Feature: domain Description: GIIM Note: maturase Location: 3396-3627 bp Feature: domain Description: GIIM Note: maturase Location: 3396-3627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: QIAT01000183.1 Acidobacteria bacterium isolate gp1 AA122 14_0903_09_20cm_scaffold_8450_curated, whole genome shotgun sequence (3830 bp)
Overview 1 RT 1: 576-3591 bp Neighborhood of RT #1 [576, 3635] DDE_Tnp_1_4 RVT_N RVT-GII GIIM HNH DDE_Tnp_1_4 Feature: gene Location: 576-914 bp Feature: domain Description: DDE_Tnp_1_4 Location: 600-882 bp Feature: domain Description: DDE_Tnp_1_4 Location: 600-882 bp Feature: gene Location: 1248-1442 bp Feature: gene Location: 1492-3216 bp Feature: RT Description: RVT_N Location: 1543-1780 bp Feature: RT Description: RVT_N Location: 15 43-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1834-2485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1834-2485 bp Feature: domain Description: GIIM Note: maturase Location: 2539-2773 bp Feature: domain Description: GIIM Note: maturase Location: 25 39-2773 bp Feature: domain Description: HNH Note: nucleases Location: 3025-3163 bp Feature: domain Description: HNH Note: nucleases Location: 3025 -3163 bp Feature: gene Location: 3222-3635 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3297-3591 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3297-35 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DDE_Tnp_1_4 (pfam13701)