myRT

myRT report for GCA_003225835.1_ASM322583v1

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Seq: QKNM01000001.1 Klebsiella pneumoniae strain Kp1934, whole genome shotgun sequence (5364760 bp)
Overview 1 RT 1: 1401962-1404781 bp 2 RT 2: 1849930-1856401 bp 3 RT 3: 3050940-3056089 bp 4 RT 4: 3213027-3216880 bp 5 RT 5: 3557298-3560203 bp 6 RT 6: 3998778-4002230 bp Neighborhood of RT #1 [1401962, 1404781] RVT-GII Neighborhood of RT #2 [1849930, 1856415] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [3050940, 3056097] umuC PRK10276 RVT-GII PinE Neighborhood of RT #4 [3213027, 3216880] umuC PRK10276 RVT-GII Neighborhood of RT #5 [3557298, 3560253] RVT-GII int Neighborhood of RT #6 [3998778, 4002286] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1401962-1402201 bp Feature: gene Location: 1402201-1402539 bp Feature: gene Location: 1402636-1404120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403038-1403728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 403038-1 403728 bp Feature: gene Location: 1404129-1404296 bp Feature: gene Location: 1404524-1404781 bp Feature: gene Location: 1849930-1851354 bp Feature: domain Description: SbcB Location: 1849936-1851352 bp Feature: domain Description: SbcB Location: 1 849936-1 851 352 bp Feature: gene Location: 1851529-1852698 bp Feature: domain Description: dacD Location: 1851538-1852693 bp Feature: domain Description: dacD Location: 1 851 538-1 852693 bp Feature: gene Location: 1853216-1854703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853621-1854311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 853621 -1 85431 1 bp Feature: gene Location: 1854785-1855258 bp Feature: domain Description: PRK10016 Location: 1854788-1855247 bp Feature: domain Description: PRK1 001 6 Location: 1 854788-1 855247 bp Feature: gene Location: 1855342-1856415 bp Feature: domain Description: YccC Location: 1855363-1856401 bp Feature: domain Description: YccC Location: 1 855363-1 856401 bp Feature: gene Location: 3050940-3052205 bp Feature: domain Description: umuC Location: 3050943-3052203 bp Feature: domain Description: umuC Location: 3050943-3052203 bp Feature: gene Location: 3052207-3052626 bp Feature: domain Description: PRK10276 Location: 3052210-3052621 bp Feature: domain Description: PRK1 0276 Location: 305221 0-3052621 bp Feature: gene Location: 3052706-3054190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3053108-3053798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30531 08-3053798 bp Feature: gene Location: 3054199-3054366 bp Feature: gene Location: 3055588-3056097 bp Feature: domain Description: PinE Location: 3055636-3056089 bp Feature: domain Description: PinE Location: 3055636-3056089 bp Feature: gene Location: 3213027-3214292 bp Feature: domain Description: umuC Location: 3213030-3214290 bp Feature: domain Description: umuC Location: 321 3030-321 4290 bp Feature: gene Location: 3214295-3214714 bp Feature: domain Description: PRK10276 Location: 3214298-3214709 bp Feature: domain Description: PRK1 0276 Location: 321 4298-321 4709 bp Feature: gene Location: 3214793-3216277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3215195-3215885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 51 95-321 5885 bp Feature: gene Location: 3216286-3216453 bp Feature: gene Location: 3216734-3216880 bp Feature: gene Location: 3557298-3558782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3557700-3558390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3557700-3558390 bp Feature: gene Location: 3558791-3558958 bp Feature: gene Location: 3559201-3560253 bp Feature: domain Description: int Location: 3559204-3560203 bp Feature: domain Description: int Location: 3559204-3560203 bp Feature: gene Location: 3998778-3999095 bp Feature: domain Description: PRK10276 Location: 3998784-3998898 bp Feature: domain Description: PRK1 0276 Location: 3998784-3998898 bp Feature: domain Description: PRK10276 Location: 3998925-3998994 bp Feature: domain Description: PRK1 0276 Location: 3998925-3998994 bp Feature: gene Location: 3999143-3999322 bp Feature: gene Location: 3999412-4000896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3999814-4000504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399981 4-4000504 bp Feature: gene Location: 4000905-4001072 bp Feature: gene Location: 4001555-4002286 bp Feature: domain Description: Laminin_G_3 Location: 4001876-4002230 bp Feature: domain Description: Laminin_G_3 Location: 4001 876-4002230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), int (PHA02601), Laminin_G_3 (pfam13385)

Seq: QKNM01000002.1 Klebsiella pneumoniae strain Kp1934, whole genome shotgun sequence (344083 bp)
Overview 1 RT 1: 189225-194706 bp 2 RT 2: 292173-295421 bp 3 RT 3: 324982-327801 bp Neighborhood of RT #1 [189225, 194714] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Neighborhood of RT #2 [292173, 295435] RVT-GII PRK10276 Neighborhood of RT #3 [324982, 327801] RVT-GII Feature: gene Location: 189225-189896 bp Feature: domain Description: Plasmid_stab_B Location: 189240-189447 bp Feature: domain Description: Plasmid_stab_B Location: 1892 40-189447 bp Feature: domain Description: Plasmid_stab_B Location: 189552-189759 bp Feature: domain Description: Plasmid_stab_B Location: 189552 -189759 bp Feature: gene Location: 189899-190870 bp Feature: domain Description: StbA Location: 189902-190847 bp Feature: domain Description: StbA Location: 189902 -190847 bp Feature: gene Location: 191119-192606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191524-192214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19152 4-192 2 14 bp Feature: gene Location: 192760-193443 bp Feature: domain Description: PRK10276 Location: 193063-193426 bp Feature: domain Description: PRK102 76 Location: 193063-19342 6 bp Feature: gene Location: 193443-194714 bp Feature: domain Description: umuC Location: 193446-194706 bp Feature: domain Description: umuC Location: 193446-194706 bp Feature: gene Location: 292173-292394 bp Feature: gene Location: 292656-292886 bp Feature: gene Location: 293120-294607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293525-294215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9352 5-2 942 15 bp Feature: gene Location: 294613-294780 bp Feature: gene Location: 295010-295435 bp Feature: domain Description: PRK10276 Location: 295013-295421 bp Feature: domain Description: PRK102 76 Location: 2 95013-2 9542 1 bp Feature: gene Location: 324982-325239 bp Feature: gene Location: 325431-325643 bp Feature: gene Location: 325718-327127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326045-326735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 6045-32 6735 bp Feature: gene Location: 327224-327562 bp Feature: gene Location: 327562-327801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)