myRT

myRT report for GCA_003227425.1_ASM322742v1

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Seq: PQUP01000010.1 Klebsiella pneumoniae subsp. pneumoniae strain DG6078 DG6078NODE_10_length_217689_cov_73.9498, whole genome shotgun sequence (217689 bp)
Overview 1 RT 1: 176119-182571 bp Neighborhood of RT #1 [176119, 182571] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 176119-176424 bp Feature: gene Location: 177307-179583 bp Feature: domain Description: AAA_15 Location: 177340-178348 bp Feature: domain Description: AAA_1 5 Location: 1 77340-1 78348 bp Feature: gene Location: 179698-180798 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 179878-180412 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 79878-1 8041 2 bp Feature: gene Location: 181454-182290 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 181943-182114 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 81 943-1 821 1 4 bp Feature: gene Location: 182320-182571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: PQUP01000001.1 Klebsiella pneumoniae subsp. pneumoniae strain DG6078 DG6078NODE_1_length_771477_cov_85.1771, whole genome shotgun sequence (771477 bp)
Overview 1 RT 1: 25631-29887 bp Neighborhood of RT #1 [25631, 29901] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25631-26068 bp Feature: domain Description: PRK10724 Location: 25634-26063 bp Feature: domain Description: PRK1072 4 Location: 2 5634-2 6063 bp Feature: gene Location: 26218-26700 bp Feature: domain Description: SmpB Location: 26248-26692 bp Feature: domain Description: SmpB Location: 2 62 48-2 6692 bp Feature: gene Location: 27315-27614 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27318-27429 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 7318-2 742 9 bp Feature: gene Location: 28057-28245 bp Feature: gene Location: 28801-29901 bp Feature: domain Description: D Location: 28807-29887 bp Feature: domain Description: D Location: 2 8807-2 9887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)

Seq: PQUP01000048.1 Klebsiella pneumoniae subsp. pneumoniae strain DG6078 DG6078NODE_48_length_1893_cov_305.978, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII