myRT

myRT report for GCA_003227515.1_ASM322751v1

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Seq: PQUX01000001.1 Klebsiella pneumoniae subsp. pneumoniae strain DG5559 DG5559NODE_1_length_771479_cov_75.0523, whole genome shotgun sequence (771479 bp)
Overview 1 RT 1: 25631-29887 bp Neighborhood of RT #1 [25631, 29901] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25631-26068 bp Feature: domain Description: PRK10724 Location: 25634-26063 bp Feature: domain Description: PRK1 0724 Location: 25634-26063 bp Feature: gene Location: 26218-26700 bp Feature: domain Description: SmpB Location: 26248-26692 bp Feature: domain Description: SmpB Location: 26248-26692 bp Feature: gene Location: 27315-27614 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27318-27429 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 2731 8-27429 bp Feature: gene Location: 28057-28245 bp Feature: gene Location: 28801-29901 bp Feature: domain Description: D Location: 28807-29887 bp Feature: domain Description: D Location: 28807-29887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)

Seq: PQUX01000027.1 Klebsiella pneumoniae subsp. pneumoniae strain DG5559 DG5559NODE_27_length_20217_cov_36.3187, whole genome shotgun sequence (20217 bp)
Overview 1 RT 1: 5925-10947 bp Neighborhood of RT #1 [5925, 10955] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 5925-6890 bp Feature: domain Description: ArdC Location: 6051-6885 bp Feature: domain Description: ArdC Location: 6051-6885 bp Feature: gene Location: 7022-7291 bp Feature: gene Location: 7360-8847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7765-8455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7765-8455 bp Feature: gene Location: 9001-9684 bp Feature: domain Description: PRK10276 Location: 9304-9667 bp Feature: domain Description: PRK102 76 Location: 9304-9667 bp Feature: gene Location: 9684-10955 bp Feature: domain Description: umuC Location: 9687-10947 bp Feature: domain Description: umuC Location: 9687-10947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)