myRT

myRT report for GCA_003229765.1_ASM322976v1

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Seq: QIFL01000298.1 Gammaproteobacteria bacterium isolate SZUA-176 Ga0063294_10026315, whole genome shotgun sequence (3914 bp)
Overview 1 RT 1: 664-3912 bp Neighborhood of RT #1 [664, 3912] RVT_N RVT-GII GIIM IS285 Feature: gene Location: 664-2127 bp Feature: RT Description: RVT_N Location: 715-946 bp Feature: RT Description: RVT_N Location: 71 5-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 003-1 627 bp Feature: domain Description: GIIM Note: maturase Location: 1678-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1 678-1 91 2 bp Feature: gene Location: 2238-3464 bp Feature: domain Description: IS285 Location: 2277-3450 bp Feature: domain Description: IS285 Location: 2277-3450 bp Feature: gene Location: 3532-3912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QIFL01000355.1 Gammaproteobacteria bacterium isolate SZUA-176 Ga0063294_10034955, whole genome shotgun sequence (3375 bp)
Overview 1 RT 1: 162-2935 bp Neighborhood of RT #1 [162, 3198] RVT_N RVT-GII GIIM DDE_5 DDE_Tnp_2 Feature: gene Location: 162-1766 bp Feature: RT Description: RVT_N Location: 168-363 bp Feature: RT Description: RVT_N Location: 168-363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1047 bp Feature: domain Description: GIIM Note: maturase Location: 1119-1353 bp Feature: domain Description: GIIM Note: maturase Location: 1119-1353 bp Feature: gene Location: 1867-3198 bp Feature: domain Description: DDE_5 Location: 2035-2650 bp Feature: domain Description: DDE_5 Location: 2 035-2 650 bp Feature: domain Description: DDE_Tnp_2 Location: 2779-2935 bp Feature: domain Description: DDE_Tnp_2 Location: 2 779-2 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546), DDE_Tnp_2 (pfam04693)

Seq: QIFL01000102.1 Gammaproteobacteria bacterium isolate SZUA-176 Ga0063294_10040082, whole genome shotgun sequence (3135 bp)
Overview 1 RT 1: 1-3058 bp Neighborhood of RT #1 [1, 3132] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII Feature: gene Location: 1-288 bp Feature: domain Description: TnpB_IS66 Location: 4-253 bp Feature: domain Description: TnpB_IS66 Location: 4-253 bp Feature: gene Location: 343-1737 bp Feature: domain Description: LZ_Tnp_IS66 Location: 448-658 bp Feature: domain Description: LZ_Tnp_IS66 Location: 448-658 bp Feature: domain Description: zf-IS66 Location: 682-814 bp Feature: domain Description: zf-IS66 Location: 682-814 bp Feature: domain Description: DDE_Tnp_IS66 Location: 859-1696 bp Feature: domain Description: DDE_Tnp_IS66 Location: 859-1696 bp Feature: gene Location: 2161-3132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2398-3058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 98-3 058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: QIFL01000552.1 Gammaproteobacteria bacterium isolate SZUA-176 Ga0063294_10056648, whole genome shotgun sequence (2598 bp)
Overview 1 RT 1: 356-2260 bp Neighborhood of RT #1 [356, 2550] COG2929 RVT-GII Feature: gene Location: 356-649 bp Feature: domain Description: COG2929 Location: 386-644 bp Feature: domain Description: COG2929 Location: 386-64 4 bp Feature: gene Location: 639-923 bp Feature: gene Location: 1234-2550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1573-2260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1573-2260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG2929 (Uncharacterized conserved protein, DUF497 family )