myRT

myRT report for GCA_003230645.1_ASM323064v1

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Seq: QIFU01000754.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10000947, whole genome shotgun sequence (20675 bp)
Overview 1 RT 1: 85-4135 bp Neighborhood of RT #1 [85, 4209] Phd RVT-GII YiaG Feature: gene Location: 85-1095 bp Feature: gene Location: 1352-1633 bp Feature: domain Description: Phd Location: 1373-1475 bp Feature: domain Description: Phd Location: 1 373-1 475 bp Feature: gene Location: 1776-3056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031-2739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031 -2739 bp Feature: gene Location: 3466-3750 bp Feature: gene Location: 3844-4209 bp Feature: domain Description: YiaG Location: 3949-4135 bp Feature: domain Description: YiaG Location: 3949-41 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phd (COG4118), RVT-GII, YiaG (COG2944)

Seq: QIFU01000677.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10011052, whole genome shotgun sequence (6328 bp)
Overview 1 RT 1: 1257-4991 bp Neighborhood of RT #1 [1257, 5026] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 1257-2141 bp Feature: gene Location: 2134-2829 bp Feature: gene Location: 2813-3751 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3026-3623 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 302 6-362 3 bp Feature: gene Location: 3752-4750 bp Feature: domain Description: Cas1_I-II-III Location: 3761-4715 bp Feature: domain Description: Cas1_I-II-III Location: 3761-4715 bp Feature: gene Location: 4802-5026 bp Feature: domain Description: Cas2_I_II_III Location: 4808-4991 bp Feature: domain Description: Cas2 _I_II_III Location: 4808-4991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: QIFU01000085.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10013330, whole genome shotgun sequence (5529 bp)
Overview 1 RT 1: 1831-5526 bp Neighborhood of RT #1 [1831, 5526] alpha_CA_prokaryotic_like COG1373 RVT-UG4 Feature: gene Location: 1831-2682 bp Feature: domain Description: alpha_CA_prokaryotic_like Location: 2041-2671 bp Feature: domain Description: alpha_CA_prokaryotic_like Location: 2041-2671 bp Feature: gene Location: 2997-4220 bp Feature: domain Description: COG1373 Location: 3030-4113 bp Feature: domain Description: COG13 73 Location: 3 03 0-4113 bp Feature: gene Location: 4244-4675 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4250-4508 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4250-4508 bp Feature: gene Location: 4861-5022 bp Feature: gene Location: 5284-5526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT alpha_CA_prokaryotic_like (cd03124), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG4

Seq: QIFU01000385.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10024350, whole genome shotgun sequence (4077 bp)
Overview 1 RT 1: 133-4069 bp Neighborhood of RT #1 [133, 4074] DUF4338 DDE_Tnp_1_assoc RVT-GII GIIM Feature: gene Location: 133-1053 bp Feature: domain Description: DUF4338 Location: 337-1018 bp Feature: domain Description: DUF4 338 Location: 337-1018 bp Feature: gene Location: 1046-2572 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1289-1547 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1289-154 7 bp Feature: gene Location: 2908-4074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3181-3847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3181-384 7 bp Feature: domain Description: GIIM Note: maturase Location: 3928-4069 bp Feature: domain Description: GIIM Note: maturase Location: 3928-4 069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4338 (pfam14236), DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)

Seq: QIFU01000348.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10031341, whole genome shotgun sequence (3579 bp)
Overview 1 RT 1: 1-2431 bp Neighborhood of RT #1 [1, 3450] R1-I-EN RVT-UNC Feature: gene Location: 1-3450 bp Feature: domain Description: R1-I-EN Location: 337-937 bp Feature: domain Description: R1-I-EN Location: 337-937 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1816-2431 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1816-2431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-UG10/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: QIFU01000202.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10032110, whole genome shotgun sequence (3532 bp)
Overview 1 RT 1: 142-2426 bp Neighborhood of RT #1 [142, 3433] L1-EN RVT-CRISPR-like Feature: gene Location: 142-270 bp Feature: gene Location: 272-3433 bp Feature: domain Description: L1-EN Location: 299-719 bp Feature: domain Description: L1-EN Location: 299-719 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2003-2426 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2003-2426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: QIFU01000040.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10032359, whole genome shotgun sequence (3518 bp)
Overview 1 RT 1: 628-3515 bp Neighborhood of RT #1 [628, 3515] PhdYeFM_antitox RelE RVT-GII Feature: gene Location: 628-897 bp Feature: domain Description: PhdYeFM_antitox Location: 661-823 bp Feature: domain Description: PhdYeFM_antitox Location: 661-823 bp Feature: gene Location: 908-1201 bp Feature: domain Description: RelE Location: 911-1172 bp Feature: domain Description: RelE Location: 911-117 2 bp Feature: gene Location: 1401-3098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2046-2733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2046-27 33 bp Feature: gene Location: 3189-3515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), RelE (pfam06296), RVT-GII

Seq: QIFU01000135.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10033438, whole genome shotgun sequence (4291 bp)
Overview 1 RT 1: 167-4289 bp Neighborhood of RT #1 [167, 4289] R1-I-EN RVT-UNC Feature: gene Location: 167-310 bp Feature: gene Location: 355-3885 bp Feature: domain Description: R1-I-EN Location: 745-1324 bp Feature: domain Description: R1-I-EN Location: 745-1324 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2188-2731 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 218 8 -2731 bp Feature: gene Location: 4062-4289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-UG10/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: QIFU01000709.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10039623, whole genome shotgun sequence (3591 bp)
Overview 1 RT 1: 169-983 bp Neighborhood of RT #1 [169, 1651] RVT-CRISPR-like Feature: gene Location: 169-546 bp Feature: gene Location: 644-1651 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 725-983 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 725-9 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: QIFU01000656.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10042503, whole genome shotgun sequence (3035 bp)
Overview 1 RT 1: 2-2313 bp Neighborhood of RT #1 [2, 2489] UPF0113 RVT_N RVT-GII KOG4768 Feature: gene Location: 2-415 bp Feature: domain Description: UPF0113 Location: 170-395 bp Feature: domain Description: UPF0113 Location: 170-395 bp Feature: gene Location: 611-1021 bp Feature: gene Location: 1014-2489 bp Feature: domain Description: RVT_N Location: 1107-1344 bp Feature: domain Description: RVT_N Location: 110 7-1344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1401-2019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1401-2019 bp Feature: domain Description: KOG4768 Location: 2142-2313 bp Feature: domain Description: KOG4768 Location: 2142-2313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0113 (pfam03657), RVT_N (pfam13655), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: QIFU01000089.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10044919, whole genome shotgun sequence (4640 bp)
Overview 1 RT 1: 175-2914 bp Neighborhood of RT #1 [175, 2914] RVT-GII GIIM Feature: gene Location: 175-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430-1096 bp Feature: domain Description: GIIM Note: maturase Location: 1180-1381 bp Feature: domain Description: GIIM Note: maturase Location: 11 80-1381 bp Feature: gene Location: 1941-2267 bp Feature: gene Location: 2366-2914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QIFU01000117.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10045011, whole genome shotgun sequence (2943 bp)
Overview 1 RT 1: 60-2493 bp Neighborhood of RT #1 [60, 2693] RVT-UNC zf-RVT Feature: gene Location: 60-2693 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1002-1515 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1002-1515 bp Feature: domain Description: zf-RVT Location: 2391-2493 bp Feature: domain Description: zf-RVT Location: 2391-2493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10/RVT-CRISPR/RVT-GII(RVT-UNC), zf-RVT (pfam13966)

Seq: QIFU01000640.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10048292, whole genome shotgun sequence (2832 bp)
Overview 1 RT 1: 229-1677 bp Neighborhood of RT #1 [229, 2696] RVT-CRISPR-like Feature: gene Location: 229-1200 bp Feature: gene Location: 1272-2696 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1275-1677 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1275-1677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: QIFU01000720.1 Planctomycetes bacterium isolate SZUA-167 Ga0063294_10189529, whole genome shotgun sequence (2552 bp)
Overview 1 RT 1: 1-2308 bp Neighborhood of RT #1 [1, 2308] RVT-UNC Feature: gene Location: 1-1290 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 718-1225 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 718-1225 bp Feature: gene Location: 1310-2308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2/RVT-CRISPR/RVT-GII(RVT-UNC)