myRT

myRT report for GCA_003232185.1_ASM323218v1

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Seq: QIMC01000337.1 Flammeovirgaceae bacterium isolate SZUA-3 Ga0063293_10000606, whole genome shotgun sequence (36606 bp)
Overview 1 RT 1: 3-4413 bp Neighborhood of RT #1 [3, 4418] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C WecE Feature: gene Location: 3-971 bp Feature: domain Description: LZ_Tnp_IS66 Location: 78-291 bp Feature: domain Description: LZ_Tnp_IS66 Location: 78-291 bp Feature: domain Description: zf-IS66 Location: 330-411 bp Feature: domain Description: zf-IS66 Location: 330-41 1 bp Feature: domain Description: DDE_Tnp_IS66 Location: 468-960 bp Feature: domain Description: DDE_Tnp_IS66 Location: 468-960 bp Feature: gene Location: 1780-2235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1954-2152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 954-21 52 bp Feature: gene Location: 2362-2982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2461-2590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2461 -2590 bp Feature: domain Description: GIIM Note: maturase Location: 2671-2896 bp Feature: domain Description: GIIM Note: maturase Location: 2671 -2896 bp Feature: gene Location: 3060-3245 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3114-3222 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31 1 4-3222 bp Feature: gene Location: 3300-4418 bp Feature: domain Description: WecE Location: 3336-4413 bp Feature: domain Description: WecE Location: 3336-441 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), WecE (COG0399)

Seq: QIMC01000474.1 Flammeovirgaceae bacterium isolate SZUA-3 Ga0063293_10011273, whole genome shotgun sequence (8673 bp)
Overview 1 RT 1: 5268-8531 bp Neighborhood of RT #1 [5268, 8531] RpoD RVT-GII GIIM Feature: gene Location: 5268-6134 bp Feature: domain Description: RpoD Location: 5295-6105 bp Feature: domain Description: RpoD Location: 52 95-6105 bp Feature: gene Location: 6507-6641 bp Feature: gene Location: 6771-8045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6984-7644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6984-7644 bp Feature: domain Description: GIIM Note: maturase Location: 7725-7917 bp Feature: domain Description: GIIM Note: maturase Location: 772 5-7917 bp Feature: gene Location: 8367-8531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoD (COG0568), RVT-GII, GIIM (pfam08388)

Seq: QIMC01000420.1 Flammeovirgaceae bacterium isolate SZUA-3 Ga0063293_10124402, whole genome shotgun sequence (3116 bp)
Overview 1 RT 1: 552-3082 bp Neighborhood of RT #1 [552, 3114] RVT-GII GAF GAF FrsA Feature: gene Location: 552-764 bp Feature: gene Location: 939-1079 bp Feature: gene Location: 1220-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1433-1730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 3 -173 0 bp Feature: gene Location: 2141-2509 bp Feature: domain Description: GAF Location: 2165-2285 bp Feature: domain Description: GAF Location: 2165-2285 bp Feature: domain Description: GAF Location: 2285-2501 bp Feature: domain Description: GAF Location: 2285-2501 bp Feature: gene Location: 2836-3114 bp Feature: domain Description: FrsA Location: 2863-3082 bp Feature: domain Description: FrsA Location: 2863 -3 082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GAF (smart00065), FrsA (COG1073)