myRT

myRT report for GCA_003233015.1_ASM323301v1

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Seq: QIKR01000179.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10028249, whole genome shotgun sequence (5234 bp)
Overview 1 RT 1: 1402-4961 bp Neighborhood of RT #1 [1402, 4961] PinE Zn_ribbon_recom RVT-GII GIIM Feature: gene Location: 1402-3462 bp Feature: domain Description: PinE Location: 1450-2095 bp Feature: domain Description: PinE Location: 1 450-2095 bp Feature: domain Description: Zn_ribbon_recom Location: 2380-2536 bp Feature: domain Description: Zn_ribbon_recom Location: 2380-2536 bp Feature: gene Location: 3496-3798 bp Feature: gene Location: 3852-4715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3864-4323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3864-4323 bp Feature: domain Description: GIIM Note: maturase Location: 4404-4611 bp Feature: domain Description: GIIM Note: maturase Location: 4404-461 1 bp Feature: gene Location: 4794-4961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388)

Seq: QIKR01000777.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10037322, whole genome shotgun sequence (4079 bp)
Overview 1 RT 1: 3-3593 bp Neighborhood of RT #1 [3, 3736] YabA RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 3-140 bp Feature: domain Description: YabA Location: 6-96 bp Feature: domain Description: YabA Location: 6-96 bp Feature: gene Location: 493-1989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907-1597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907-1597 bp Feature: domain Description: GIIM Note: maturase Location: 1666-1888 bp Feature: domain Description: GIIM Note: maturase Location: 1666-1888 bp Feature: gene Location: 2195-3736 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2792-3593 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 792 -3593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YabA (COG4467), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: QIKR01000684.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10041691, whole genome shotgun sequence (3827 bp)
Overview 1 RT 1: 2156-3810 bp Neighborhood of RT #1 [2156, 3824] HEAT_2 HEAT_2 RVT-GII Feature: gene Location: 2156-3211 bp Feature: domain Description: HEAT_2 Location: 2471-2684 bp Feature: domain Description: HEAT_2 Location: 2471-2684 bp Feature: domain Description: HEAT_2 Location: 2756-2960 bp Feature: domain Description: HEAT_2 Location: 2756-2960 bp Feature: gene Location: 3224-3385 bp Feature: gene Location: 3300-3824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3720-3810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 720-3 810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT-GII

Seq: QIKR01001052.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10045271, whole genome shotgun sequence (3648 bp)
Overview 1 RT 1: 5-2928 bp Neighborhood of RT #1 [5, 3023] zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 5-1471 bp Feature: domain Description: zf-IS66 Location: 326-461 bp Feature: domain Description: zf-IS66 Location: 326-4 61 bp Feature: domain Description: DDE_Tnp_IS66 Location: 506-1346 bp Feature: domain Description: DDE_Tnp_IS66 Location: 506-134 6 bp Feature: gene Location: 1686-3023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2046-2667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204 6-2667 bp Feature: domain Description: GIIM Note: maturase Location: 2712-2928 bp Feature: domain Description: GIIM Note: maturase Location: 2712-2928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: QIKR01000258.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10079980, whole genome shotgun sequence (2613 bp)
Overview 1 RT 1: 1-2589 bp Neighborhood of RT #1 [1, 2612] RVT-GII GIIM HTH_XRE Feature: gene Location: 1-180 bp Feature: gene Location: 218-517 bp Feature: gene Location: 514-1917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 865-1489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 865 -1489 bp Feature: domain Description: GIIM Note: maturase Location: 1531-1729 bp Feature: domain Description: GIIM Note: maturase Location: 15 31-1729 bp Feature: gene Location: 2355-2612 bp Feature: domain Description: HTH_XRE Location: 2436-2589 bp Feature: domain Description: HTH_XRE Location: 2436-25 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530)

Seq: QIKR01000872.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10081743, whole genome shotgun sequence (3628 bp)
Overview 1 RT 1: 2-3625 bp Neighborhood of RT #1 [2, 3625] RVT-Retrons Trypsin_2 Feature: gene Location: 2-295 bp Feature: gene Location: 568-807 bp Feature: gene Location: 1508-3217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1646-2237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16 46 -2237 bp Feature: domain Description: Trypsin_2 Location: 2657-3083 bp Feature: domain Description: Trypsin_2 Location: 26 57-3083 bp Feature: gene Location: 3335-3625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365)

Seq: QIKR01000505.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10084999, whole genome shotgun sequence (2520 bp)
Overview 1 RT 1: 1-1647 bp Neighborhood of RT #1 [1, 1850] RVT-GII GIIM Feature: gene Location: 1-387 bp Feature: gene Location: 465-1850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 59-1380 bp Feature: domain Description: GIIM Note: maturase Location: 1425-1647 bp Feature: domain Description: GIIM Note: maturase Location: 1425-1647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QIKR01000613.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10122301, whole genome shotgun sequence (4317 bp)
Overview 1 RT 1: 1-4221 bp Neighborhood of RT #1 [1, 4221] RVT-GII GIIM group_II_RT_mat Feature: gene Location: 1-759 bp Feature: gene Location: 783-1868 bp Feature: gene Location: 2274-3395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2277-2868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2277-28 68 bp Feature: domain Description: GIIM Note: maturase Location: 2916-3126 bp Feature: domain Description: GIIM Note: maturase Location: 2916-3126 bp Feature: gene Location: 3428-3856 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3707-3839 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3707-38 39 bp Feature: gene Location: 3919-4221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: QIKR01000596.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10151294, whole genome shotgun sequence (2568 bp)
Overview 1 RT 1: 1413-2564 bp Neighborhood of RT #1 [1413, 2566] RVT-GII Feature: gene Location: 1413-1676 bp Feature: gene Location: 1675-2010 bp Feature: gene Location: 2204-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2306-2564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2306-2564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QIKR01000312.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10202451, whole genome shotgun sequence (2547 bp)
Overview 1 RT 1: 1-2545 bp Neighborhood of RT #1 [1, 2545] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 1-201 bp Feature: gene Location: 952-1242 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1015-1177 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 10 15-1177 bp Feature: gene Location: 1338-2132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1353-1788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1353-1788 bp Feature: domain Description: GIIM Note: maturase Location: 1833-2025 bp Feature: domain Description: GIIM Note: maturase Location: 1833-2025 bp Feature: gene Location: 2351-2545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: QIKR01000381.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10204580, whole genome shotgun sequence (2528 bp)
Overview 1 RT 1: 676-2276 bp Neighborhood of RT #1 [676, 2464] RVT-GII GIIM Feature: gene Location: 676-1122 bp Feature: gene Location: 1221-1790 bp Feature: gene Location: 1478-2464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1481-2018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1481-2018 bp Feature: domain Description: GIIM Note: maturase Location: 2066-2276 bp Feature: domain Description: GIIM Note: maturase Location: 2066-2276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QIKR01001045.1 Planctomycetaceae bacterium isolate SZUA-40 Ga0063293_10307650, whole genome shotgun sequence (2643 bp)
Overview 1 RT 1: 294-2086 bp Neighborhood of RT #1 [294, 2086] RVT-GII GIIM group_II_RT_mat Feature: gene Location: 294-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-657 bp Feature: domain Description: GIIM Note: maturase Location: 708-909 bp Feature: domain Description: GIIM Note: maturase Location: 708-909 bp Feature: gene Location: 1134-1856 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1467-1617 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1467-1617 bp Feature: gene Location: 1895-2086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)