myRT

myRT report for GCA_003235275.1_ASM323527v1

Download annotations/find similar RTs

Seq: QJWT01000351.1 Proteobacteria bacterium isolate SZUA-275 scaffold_212253, whole genome shotgun sequence (2597 bp)
Overview 1 RT 1: 44-2301 bp Neighborhood of RT #1 [44, 2390] RVT-GII GIIM Feature: gene Location: 44-274 bp Feature: gene Location: 851-1123 bp Feature: gene Location: 1140-2390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1344-1998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 344-1 998 bp Feature: domain Description: GIIM Note: maturase Location: 2082-2301 bp Feature: domain Description: GIIM Note: maturase Location: 2082-2301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QJWT01000664.1 Proteobacteria bacterium isolate SZUA-275 scaffold_31572, whole genome shotgun sequence (6932 bp)
Overview 1 RT 1: 2-6232 bp Neighborhood of RT #1 [2, 6930] RVT-DGRs Peptidase_A17 Integrase_H2C2 rve DUF5641 DUF1759 Feature: gene Location: 2-586 bp Feature: gene Location: 739-4890 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1807-2140 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1807-2 140 bp Feature: domain Description: Peptidase_A17 Location: 2371-2839 bp Feature: domain Description: Peptidase_A17 Location: 2 371-2 839 bp Feature: domain Description: Integrase_H2C2 Location: 3562-3691 bp Feature: domain Description: Integrase_H2 C2 Location: 3562 -3691 bp Feature: domain Description: rve Location: 3778-4159 bp Feature: domain Description: rve Location: 3778-4159 bp Feature: domain Description: DUF5641 Location: 4387-4630 bp Feature: domain Description: DUF5641 Location: 4387-4630 bp Feature: gene Location: 5092-6930 bp Feature: domain Description: DUF1759 Location: 5797-6232 bp Feature: domain Description: DUF1759 Location: 5797-62 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1759 (pfam03564), RVT-DGRs, Peptidase_A17 (pfam05380), Integrase_H2C2 (pfam17921), rve (pfam00665), DUF5641 (pfam18701)