myRT

myRT report for GCA_003236385.1_ASM323638v1

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Seq: POUA01000122.1 Sphaerisporangium sp. 7K107 NODE_122_length_18737_cov_38.9701, whole genome shotgun sequence (18737 bp)
Overview 1 RT 1: 9476-12389 bp Neighborhood of RT #1 [9476, 12394] FGE-sulfatase RVT-CRISPR-like NrdG PTPS Feature: gene Location: 9476-9754 bp Feature: gene Location: 9889-10416 bp Feature: domain Description: FGE-sulfatase Location: 9946-10408 bp Feature: domain Description: FGE-sulfatase Location: 9946-1 0408 bp Feature: gene Location: 10430-11359 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10802-11324 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 0802-1 1 324 bp Feature: gene Location: 11349-12032 bp Feature: domain Description: NrdG Location: 11352-12015 bp Feature: domain Description: NrdG Location: 1 1 352-1 201 5 bp Feature: gene Location: 12029-12394 bp Feature: domain Description: PTPS Location: 12041-12389 bp Feature: domain Description: PTPS Location: 1 2041 -1 2389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), RVT-CRISPR, NrdG (TIGR02491), PTPS (pfam01242)

Seq: POUA01000012.1 Sphaerisporangium sp. 7K107 NODE_12_length_48189_cov_31.1619, whole genome shotgun sequence (48189 bp)
Overview 1 RT 1: 11629-15057 bp Neighborhood of RT #1 [11629, 15057] DUF2243 DDE_Tnp_Tn3 RVT-GII GIIM Feature: gene Location: 11629-12216 bp Feature: domain Description: DUF2243 Location: 11695-12082 bp Feature: domain Description: DUF2 2 43 Location: 11695-12 082 bp Feature: gene Location: 12536-12748 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 12539-12680 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 12 539-12 680 bp Feature: gene Location: 12974-13615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12977-13226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 977-132 2 6 bp Feature: domain Description: GIIM Note: maturase Location: 13319-13535 bp Feature: domain Description: GIIM Note: maturase Location: 13319-13535 bp Feature: gene Location: 14093-14407 bp Feature: gene Location: 14920-15057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2243 (pfam10002), DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388)

Seq: POUA01000213.1 Sphaerisporangium sp. 7K107 NODE_213_length_13033_cov_53.395, whole genome shotgun sequence (13032 bp)
Overview 1 RT 1: 9135-12584 bp Neighborhood of RT #1 [9135, 12584] PMT RVT-GII zf-ISL3 Feature: gene Location: 9135-10556 bp Feature: domain Description: PMT Location: 9399-9699 bp Feature: domain Description: PMT Location: 93 99-9699 bp Feature: gene Location: 11184-11339 bp Feature: gene Location: 11361-12107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11772-11976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11772-11976 bp Feature: gene Location: 12130-12384 bp Feature: domain Description: zf-ISL3 Location: 12220-12349 bp Feature: domain Description: zf-ISL3 Location: 12220-123 49 bp Feature: gene Location: 12387-12584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PMT (pfam02366), RVT-GII, zf-ISL3 (pfam14690)

Seq: POUA01000288.1 Sphaerisporangium sp. 7K107 NODE_288_length_10233_cov_35.6814, whole genome shotgun sequence (10233 bp)
Overview 1 RT 1: 7589-10233 bp Neighborhood of RT #1 [7589, 10232] DUF397 DDE_Tnp_4 RVT-GII DUF4096 Feature: gene Location: 7589-7873 bp Feature: domain Description: DUF397 Location: 7691-7847 bp Feature: domain Description: DUF397 Location: 7691-784 7 bp Feature: gene Location: 7948-8559 bp Feature: domain Description: DDE_Tnp_4 Location: 8098-8419 bp Feature: domain Description: DDE_Tnp_4 Location: 8098-84 19 bp Feature: gene Location: 9451-10005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9616-9997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9616-9997 bp Feature: gene Location: 10080-10232 bp Feature: domain Description: DUF4096 Location: 10110-10233 bp Feature: domain Description: DUF4 096 Location: 10110-10233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF397 (pfam04149), DDE_Tnp_4 (pfam13359), RVT-GII, DUF4096 (pfam13340)

Seq: POUA01000344.1 Sphaerisporangium sp. 7K107 NODE_344_length_8246_cov_43.5931, whole genome shotgun sequence (8245 bp)
Overview 1 RT 1: 4393-8242 bp Neighborhood of RT #1 [4393, 8242] COG3293 COG3293 RVT-GII GIIM Feature: gene Location: 4393-4707 bp Feature: gene Location: 4936-5760 bp Feature: domain Description: COG3293 Location: 4951-5284 bp Feature: domain Description: COG3293 Location: 495 1-5 284 bp Feature: domain Description: COG3293 Location: 5332-5710 bp Feature: domain Description: COG3293 Location: 5 332-5 710 bp Feature: gene Location: 5866-7134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6082-6742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6082-6742 bp Feature: domain Description: GIIM Note: maturase Location: 6835-7045 bp Feature: domain Description: GIIM Note: maturase Location: 6835 -7045 bp Feature: gene Location: 7955-8242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3293 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: POUA01000647.1 Sphaerisporangium sp. 7K107 NODE_647_length_2159_cov_88.6973, whole genome shotgun sequence (2159 bp)
Overview 1 RT 1: 601-1861 bp Neighborhood of RT #1 [601, 1986] RVT-GII GIIM Feature: gene Location: 601-1986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928-1558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928-1558 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1861 bp Feature: domain Description: GIIM Note: maturase Location: 16 42-186 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POUA01000006.1 Sphaerisporangium sp. 7K107 NODE_6_length_53759_cov_40.1034, whole genome shotgun sequence (53759 bp)
Overview 1 RT 1: 961-7999 bp Neighborhood of RT #1 [961, 8232] TraC-F-type SXT_TraD RVT-GII GIIM Replic_Relax Feature: gene Location: 961-2739 bp Feature: domain Description: TraC-F-type Location: 1264-2551 bp Feature: domain Description: TraC-F-type Location: 1264-2551 bp Feature: gene Location: 2736-4781 bp Feature: domain Description: SXT_TraD Location: 3906-4062 bp Feature: domain Description: SXT_TraD Location: 3906-4062 bp Feature: gene Location: 5316-6752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5637-6321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5637 -6321 bp Feature: domain Description: GIIM Note: maturase Location: 6396-6624 bp Feature: domain Description: GIIM Note: maturase Location: 6396-6624 bp Feature: gene Location: 6749-7318 bp Feature: gene Location: 7342-8232 bp Feature: domain Description: Replic_Relax Location: 7441-7999 bp Feature: domain Description: Replic_Relax Location: 7 441-7 999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), SXT_TraD (TIGR03743), RVT-GII, GIIM (pfam08388), Replic_Relax (pfam13814)