myRT

myRT report for GCA_003240455.1_ASM324045v1

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Seq: QHGT01000136.1 Enterococcus faecium strain 19 NODE_136_length_3244_cov_193.944, whole genome shotgun sequence (3244 bp)
Overview 1 RT 1: 41-3105 bp Neighborhood of RT #1 [41, 3137] RVT-AbiP2 HsdM Feature: gene Location: 41-1516 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 389-854 bp Feature: gene Location: 1854-3137 bp Feature: domain Description: HsdM Location: 1875-3105 bp Feature: domain Description: HsdM Location: 1 875-31 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: QHGT01000144.1 Enterococcus faecium strain 19 NODE_144_length_2747_cov_405.092, whole genome shotgun sequence (2747 bp)
Overview 1 RT 1: 319-2503 bp Neighborhood of RT #1 [319, 2616] RVT-GII HNHc Feature: gene Location: 319-552 bp Feature: gene Location: 739-2616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2350-2503 bp Feature: domain Description: HNHc Note: nucleases Location: 2 350-2 503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: QHGT01000056.1 Enterococcus faecium strain 19 NODE_56_length_19455_cov_142.459, whole genome shotgun sequence (19455 bp)
Overview 1 RT 1: 12838-17579 bp Neighborhood of RT #1 [12838, 17656] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 12838-13341 bp Feature: domain Description: ArdA Location: 12856-13327 bp Feature: domain Description: ArdA Location: 12856-13 3 27 bp Feature: gene Location: 13343-13552 bp Feature: gene Location: 13682-15592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14015-14753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14015-14753 bp Feature: domain Description: HNHc Note: nucleases Location: 15308-15473 bp Feature: domain Description: HNHc Note: nucleases Location: 153 08-15473 bp Feature: gene Location: 16101-16250 bp Feature: gene Location: 16472-17656 bp Feature: domain Description: HTH_XRE Location: 16502-16646 bp Feature: domain Description: HTH_XRE Location: 16502-16646 bp Feature: domain Description: Rol_Rep_N Location: 16679-16943 bp Feature: domain Description: Rol_Rep_N Location: 16679-16943 bp Feature: domain Description: Rep_trans Location: 16967-17579 bp Feature: domain Description: Rep_trans Location: 16967-17579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)