myRT

myRT report for GCA_003240565.1_ASM324056v1

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Seq: PCDQ01000012.1 Rhizobium tumorigenes strain 1078 NODE_45_length_12499_cov_45.7906_ID_89, whole genome shotgun sequence (12499 bp)
Overview 1 RT 1: 10484-12445 bp Neighborhood of RT #1 [10484, 12445] Cyclase RVT-GII DDE_Tnp_1_5 Feature: gene Location: 10484-11257 bp Feature: domain Description: Cyclase Location: 10502-11042 bp Feature: domain Description: Cyclase Location: 1 0502-1 1 042 bp Feature: gene Location: 11337-11480 bp Feature: gene Location: 11477-11731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11483-11690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 483-1 1 690 bp Feature: gene Location: 12069-12260 bp Feature: domain Description: DDE_Tnp_1_5 Location: 12087-12258 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 1 2087-1 2258 bp Feature: gene Location: 12263-12445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cyclase (pfam04199), RVT-GII, DDE_Tnp_1_5 (pfam13737)

Seq: PCDQ01000041.1 Rhizobium tumorigenes strain 1078 NODE_72_length_3438_cov_39.4497_ID_143, whole genome shotgun sequence (3438 bp)
Overview 1 RT 1: 2-3124 bp Neighborhood of RT #1 [2, 3153] RVT-GII GIIM DDE_Tnp_IS66 RVT-GII GIIM RVT-GII TnpB_IS66 Feature: gene Location: 2-166 bp Feature: gene Location: 261-725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264-348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 64-348 bp Feature: domain Description: GIIM Note: maturase Location: 417-630 bp Feature: domain Description: GIIM Note: maturase Location: 417-630 bp Feature: gene Location: 751-1116 bp Feature: domain Description: DDE_Tnp_IS66 Location: 787-1075 bp Feature: domain Description: DDE_Tnp_IS66 Location: 787-1075 bp Feature: gene Location: 1169-1879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1328-1487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 8-1487 bp Feature: domain Description: GIIM Note: maturase Location: 1574-1784 bp Feature: domain Description: GIIM Note: maturase Location: 1574-1784 bp Feature: gene Location: 1707-2420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914-2415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914-2 415 bp Feature: gene Location: 2635-2763 bp Feature: gene Location: 2839-3153 bp Feature: domain Description: TnpB_IS66 Location: 2872-3124 bp Feature: domain Description: TnpB_IS66 Location: 2 872 -312 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)