myRT

myRT report for GCA_003241655.1_ASM324165v1

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Seq: QFPA01000557.1 Pseudomonas oleovorans isolate S2_006_000_R1_56 S2_006_000_R1_scaffold_17203, whole genome shotgun sequence (2124 bp)
Overview 1 RT 1: 158-2100 bp Neighborhood of RT #1 [158, 2123] RVT-GII GIIM TnpB_IS66 Feature: gene Location: 158-1426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362-1019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362-1 01 9 bp Feature: domain Description: GIIM Note: maturase Location: 1097-1319 bp Feature: domain Description: GIIM Note: maturase Location: 1 097-1 31 9 bp Feature: gene Location: 1938-2123 bp Feature: domain Description: TnpB_IS66 Location: 1950-2100 bp Feature: domain Description: TnpB_IS66 Location: 1 950-21 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)

Seq: QFPA01000566.1 Pseudomonas oleovorans isolate S2_006_000_R1_56 S2_006_000_R1_scaffold_18653, whole genome shotgun sequence (2026 bp)
Overview 1 RT 1: 2-2025 bp Neighborhood of RT #1 [2, 2024] RVT-GII YkfC HNHc hisB Feature: gene Location: 2-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-62 6 bp Feature: domain Description: YkfC Location: 845-962 bp Feature: domain Description: YkfC Location: 845-962 bp Feature: domain Description: HNHc Note: nucleases Location: 1163-1319 bp Feature: domain Description: HNHc Note: nucleases Location: 1163-1319 bp Feature: gene Location: 1479-2024 bp Feature: domain Description: hisB Location: 1536-2025 bp Feature: domain Description: hisB Location: 1536-2 02 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hisB (PRK13598), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: QFPA01000581.1 Pseudomonas oleovorans isolate S2_006_000_R1_56 S2_006_000_R1_scaffold_20331, whole genome shotgun sequence (1929 bp)
Overview 1 RT 1: 72-1230 bp Neighborhood of RT #1 [72, 1397] RVT-GII GIIM Feature: gene Location: 72-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 3 -948 bp Feature: domain Description: GIIM Note: maturase Location: 1002-1230 bp Feature: domain Description: GIIM Note: maturase Location: 1002-123 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QFPA01000607.1 Pseudomonas oleovorans isolate S2_006_000_R1_56 S2_006_000_R1_scaffold_23588, whole genome shotgun sequence (1774 bp)
Overview 1 RT 1: 72-1771 bp Neighborhood of RT #1 [72, 1771] RVT-GII GIIM Feature: gene Location: 72-1493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 29-104 4 bp Feature: domain Description: GIIM Note: maturase Location: 1098-1326 bp Feature: domain Description: GIIM Note: maturase Location: 1098-1326 bp Feature: gene Location: 1643-1771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QFPA01000705.1 Pseudomonas oleovorans isolate S2_006_000_R1_56 S2_006_000_R1_scaffold_45446, whole genome shotgun sequence (1462 bp)
Overview 1 RT 1: 199-1381 bp Neighborhood of RT #1 [199, 1461] RVT-GII GIIM Feature: gene Location: 199-1461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 496-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 496-1114 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QFPA01000742.1 Pseudomonas oleovorans isolate S2_006_000_R1_56 S2_006_000_R1_scaffold_55355, whole genome shotgun sequence (1081 bp)
Overview 1 RT 1: 1-908 bp Neighborhood of RT #1 [1, 1078] DDE_Tnp_IS66 RVT-GII Feature: gene Location: 1-330 bp Feature: domain Description: DDE_Tnp_IS66 Location: 25-319 bp Feature: domain Description: DDE_Tnp_IS6 6 Location: 25-319 bp Feature: gene Location: 443-1078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599-908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599-908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII