myRT

myRT report for GCA_003242035.1_ASM324203v1

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Seq: QBMC01000030.1 Leptolyngbya foveolarum isolate ULC129bin1 scaffold30_size31550, whole genome shotgun sequence (31550 bp)
Overview 1 RT 1: 12524-18819 bp Neighborhood of RT #1 [12524, 18839] MATE_NorM_like GlxA RVT_N RVT-GII RVT-GII GIIM HNHc YjzC Feature: gene Location: 12524-13906 bp Feature: domain Description: MATE_NorM_like Location: 12566-13880 bp Feature: domain Description: MATE_NorM_like Location: 1 2566-1 3880 bp Feature: gene Location: 14049-14921 bp Feature: domain Description: GlxA Location: 14514-14916 bp Feature: domain Description: GlxA Location: 1 451 4-1 491 6 bp Feature: gene Location: 15063-16574 bp Feature: RT Description: RVT_N Location: 15099-15345 bp Feature: RT Description: RVT_N Location: 1 5099-1 5345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15396-15816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5396-1 581 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15825-15990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5825-1 5990 bp Feature: domain Description: GIIM Note: maturase Location: 16047-16239 bp Feature: domain Description: GIIM Note: maturase Location: 1 6047-1 6239 bp Feature: domain Description: HNHc Note: nucleases Location: 16419-16554 bp Feature: domain Description: HNHc Note: nucleases Location: 1 641 9-1 6554 bp Feature: gene Location: 17343-18647 bp Feature: gene Location: 18657-18839 bp Feature: domain Description: YjzC Location: 18669-18819 bp Feature: domain Description: YjzC Location: 1 8669-1 881 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MATE_NorM_like (cd13137), GlxA (COG4977), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YjzC (pfam14168)

Seq: QBMC01000008.1 Leptolyngbya foveolarum isolate ULC129bin1 scaffold8_size58851, whole genome shotgun sequence (58851 bp)
Overview 1 RT 1: 2993-8915 bp Neighborhood of RT #1 [2993, 9016] COG3666 DDE_Tnp_1_6 RVT-GII GIIM HNHc DUF5372 PinE Zn_ribbon_recom Recombinase HTH_MerR-SF Feature: gene Location: 2993-3151 bp Feature: gene Location: 3289-4947 bp Feature: domain Description: COG3666 Location: 3301-3763 bp Feature: domain Description: COG3666 Location: 3301-3763 bp Feature: domain Description: DDE_Tnp_1_6 Location: 4513-4876 bp Feature: domain Description: DDE_Tnp_1_6 Location: 4513-4876 bp Feature: gene Location: 5050-6456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5065-5710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5065-5710 bp Feature: domain Description: GIIM Note: maturase Location: 5770-5998 bp Feature: domain Description: GIIM Note: maturase Location: 5770-5998 bp Feature: domain Description: HNHc Note: nucleases Location: 6220-6382 bp Feature: domain Description: HNHc Note: nucleases Location: 62 2 0-6382 bp Feature: gene Location: 6474-6731 bp Feature: domain Description: DUF5372 Location: 6492-6645 bp Feature: domain Description: DUF5372 Location: 6492 -6645 bp Feature: gene Location: 6932-9016 bp Feature: domain Description: PinE Location: 6971-7568 bp Feature: domain Description: PinE Location: 6971-7568 bp Feature: domain Description: Zn_ribbon_recom Location: 7931-8099 bp Feature: domain Description: Zn_ribbon_recom Location: 7931-8099 bp Feature: domain Description: Recombinase Location: 8630-8756 bp Feature: domain Description: Recombinase Location: 8630-8756 bp Feature: domain Description: HTH_MerR-SF Location: 8807-8915 bp Feature: domain Description: HTH_MerR-SF Location: 8807-8915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF5372 (pfam17342), PinE (COG1961), Zn_ribbon_recom (pfam13408), Recombinase (pfam07508), HTH_MerR-SF (cl02600)