myRT

myRT report for GCA_003242125.1_ASM324212v1

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Seq: QBMQ01000014.1 Phormidesmis priestleyi isolate ULC007bin1 scaffold14_size97919, whole genome shotgun sequence (97919 bp)
Overview 1 RT 1: 12049-15793 bp Neighborhood of RT #1 [12049, 15942] PRK09907 RVT-UG12 PhoH YlqC Feature: gene Location: 12049-12378 bp Feature: domain Description: PRK09907 Location: 12055-12376 bp Feature: domain Description: PRK09907 Location: 1 2055-1 2376 bp Feature: gene Location: 12507-12647 bp Feature: gene Location: 12674-14251 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 13019-13472 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 301 9-1 3472 bp Feature: gene Location: 14416-15369 bp Feature: domain Description: PhoH Location: 14428-15364 bp Feature: domain Description: PhoH Location: 1 4428-1 5364 bp Feature: gene Location: 15556-15942 bp Feature: domain Description: YlqC Location: 15589-15793 bp Feature: domain Description: YlqC Location: 1 5589-1 5793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09907 (endoribonuclease MazF), RVT-UG12, PhoH (pfam02562), YlqC (COG1837)

Seq: QBMQ01000019.1 Phormidesmis priestleyi isolate ULC007bin1 scaffold19_size114207, whole genome shotgun sequence (114207 bp)
Overview 1 RT 1: 112086-114201 bp Neighborhood of RT #1 [112086, 114206] SgaA_N_like RVT-GII GIIM HNHc Feature: gene Location: 112086-112445 bp Feature: domain Description: SgaA_N_like Location: 112107-112413 bp Feature: domain Description: SgaA_N_like Location: 112 107-112 413 bp Feature: gene Location: 112447-112605 bp Feature: gene Location: 112764-114206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112881-113526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 881-11352 6 bp Feature: domain Description: GIIM Note: maturase Location: 113598-113832 bp Feature: domain Description: GIIM Note: maturase Location: 113598-113832 bp Feature: domain Description: HNHc Note: nucleases Location: 114054-114201 bp Feature: domain Description: HNHc Note: nucleases Location: 114054-1142 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SgaA_N_like (cd07247), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: QBMQ01000022.1 Phormidesmis priestleyi isolate ULC007bin1 scaffold22_size79746, whole genome shotgun sequence (79746 bp)
Overview 1 RT 1: 74119-77094 bp Neighborhood of RT #1 [74119, 77094] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 74119-74439 bp Feature: domain Description: InsE Location: 74122-74383 bp Feature: domain Description: InsE Location: 74122-743 83 bp Feature: gene Location: 74457-75260 bp Feature: domain Description: PHA02517 Location: 74547-75234 bp Feature: domain Description: PHA02517 Location: 74547-7523 4 bp Feature: gene Location: 75348-76034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75369-75672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753 69-75672 bp Feature: domain Description: GIIM Note: maturase Location: 75753-75957 bp Feature: domain Description: GIIM Note: maturase Location: 75753 -75957 bp Feature: gene Location: 76364-76603 bp Feature: gene Location: 76840-77094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: QBMQ01000049.1 Phormidesmis priestleyi isolate ULC007bin1 scaffold49_size35207, whole genome shotgun sequence (35207 bp)
Overview 1 RT 1: 31375-34341 bp Neighborhood of RT #1 [31375, 34341] RVT-GII RVT-GII GIIM TPR Feature: gene Location: 31375-31656 bp Feature: gene Location: 31645-31773 bp Feature: gene Location: 31932-32651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32208-32646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32208-3264 6 bp Feature: gene Location: 32724-33266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32733-32829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32733-32829 bp Feature: domain Description: GIIM Note: maturase Location: 32871-33078 bp Feature: domain Description: GIIM Note: maturase Location: 32871-33078 bp Feature: gene Location: 33386-33775 bp Feature: domain Description: TPR Location: 33425-33731 bp Feature: domain Description: TPR Location: 334 25-33731 bp Feature: gene Location: 33772-34341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TPR (smart00028)