myRT

myRT report for GCA_003242935.1_ASM324293v1

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Seq: QHLB01000124.1 Enterococcus faecium strain 558 NODE_189_length_3835_cov_12.262842, whole genome shotgun sequence (3985 bp)
Overview 1 RT 1: 2-3837 bp Neighborhood of RT #1 [2, 3851] AAA_10 RVT-GII AAA_10 Feature: gene Location: 2-376 bp Feature: domain Description: AAA_10 Location: 155-341 bp Feature: domain Description: AAA_1 0 Location: 1 55-341 bp Feature: gene Location: 1073-2899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373-2072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 373-2072 bp Feature: gene Location: 3033-3851 bp Feature: domain Description: AAA_10 Location: 3039-3837 bp Feature: domain Description: AAA_1 0 Location: 3039-3837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII

Seq: QHLB01000408.1 Enterococcus faecium strain 558 NODE_642_length_25681_cov_15.550757, whole genome shotgun sequence (25831 bp)
Overview 1 RT 1: 4360-9918 bp Neighborhood of RT #1 [4360, 9926] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 4360-5502 bp Feature: domain Description: Dcm Location: 4363-5476 bp Feature: domain Description: Dcm Location: 4363-5476 bp Feature: gene Location: 5547-5927 bp Feature: domain Description: FtsK Location: 5562-5802 bp Feature: domain Description: FtsK Location: 5562 -5802 bp Feature: gene Location: 6029-7903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6395-7091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6395-7091 bp Feature: domain Description: HNHc Note: nucleases Location: 7631-7790 bp Feature: domain Description: HNHc Note: nucleases Location: 7631-7790 bp Feature: gene Location: 8497-9528 bp Feature: domain Description: FtsK_SpoIIIE Location: 9169-9409 bp Feature: domain Description: FtsK_SpoIIIE Location: 9169-9409 bp Feature: gene Location: 9582-9926 bp Feature: domain Description: RelB_DinJ Location: 9792-9918 bp Feature: domain Description: RelB_DinJ Location: 9792 -9918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: QHLB01000008.1 Enterococcus faecium strain 558 NODE_8_length_3369_cov_33.726921, whole genome shotgun sequence (3519 bp)
Overview 1 RT 1: 113-3372 bp Neighborhood of RT #1 [113, 3404] RVT-AbiP2 HsdM Feature: gene Location: 113-1588 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 461-926 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 461-926 bp Feature: gene Location: 1926-3404 bp Feature: domain Description: HsdM Location: 1947-3372 bp Feature: domain Description: HsdM Location: 1947-3 3 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)