myRT

myRT report for GCA_003243545.1_ASM324354v1

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Seq: QFRB01000646.1 Pseudomonas oleovorans isolate S2_003_000_R1_2 S2_003_000_R1_scaffold_11797, whole genome shotgun sequence (2232 bp)
Overview 1 RT 1: 673-2230 bp Neighborhood of RT #1 [673, 2229] RVT_N RVT-GII GIIM Feature: gene Location: 673-801 bp Feature: gene Location: 976-2229 bp Feature: RT Description: RVT_N Location: 1036-1279 bp Feature: RT Description: RVT_N Location: 1 036-1 279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1327-1975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 327-1 975 bp Feature: domain Description: GIIM Note: maturase Location: 2056-2230 bp Feature: domain Description: GIIM Note: maturase Location: 2056-2230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QFRB01000762.1 Pseudomonas oleovorans isolate S2_003_000_R1_2 S2_003_000_R1_scaffold_15330, whole genome shotgun sequence (2525 bp)
Overview 1 RT 1: 174-2295 bp Neighborhood of RT #1 [174, 2342] RVT-GII GIIM TnpB_IS66 TnpB_IS66 Feature: gene Location: 174-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1035 bp Feature: domain Description: GIIM Note: maturase Location: 1113-1335 bp Feature: domain Description: GIIM Note: maturase Location: 1113-1335 bp Feature: domain Description: TnpB_IS66 Location: 1473-1611 bp Feature: domain Description: TnpB_IS66 Location: 1473-1611 bp Feature: gene Location: 2097-2342 bp Feature: domain Description: TnpB_IS66 Location: 2127-2295 bp Feature: domain Description: TnpB_IS66 Location: 2 12 7-2 2 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)

Seq: QFRB01000789.1 Pseudomonas oleovorans isolate S2_003_000_R1_2 S2_003_000_R1_scaffold_16548, whole genome shotgun sequence (1839 bp)
Overview 1 RT 1: 3-1161 bp Neighborhood of RT #1 [3, 1307] RVT-GII GIIM Feature: gene Location: 3-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264-879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264-879 bp Feature: domain Description: GIIM Note: maturase Location: 933-1161 bp Feature: domain Description: GIIM Note: maturase Location: 93 3 -1161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QFRB01001069.1 Pseudomonas oleovorans isolate S2_003_000_R1_2 S2_003_000_R1_scaffold_36674, whole genome shotgun sequence (1180 bp)
Overview 1 RT 1: 1-1160 bp Neighborhood of RT #1 [1, 1177] DDE_Tnp_IS66 RVT-GII Feature: gene Location: 1-582 bp Feature: domain Description: DDE_Tnp_IS66 Location: 25-583 bp Feature: domain Description: DDE_Tnp_IS66 Location: 25-583 bp Feature: gene Location: 695-1177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: QFRB01001142.1 Pseudomonas oleovorans isolate S2_003_000_R1_2 S2_003_000_R1_scaffold_47977, whole genome shotgun sequence (1016 bp)
Overview 1 RT 1: 1-1015 bp Neighborhood of RT #1 [1, 1014] RVT-GII GIIM Feature: gene Location: 1-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 178-796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 178-796 bp Feature: domain Description: GIIM Note: maturase Location: 853-1015 bp Feature: domain Description: GIIM Note: maturase Location: 85 3-1015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QFRB01001148.1 Pseudomonas oleovorans isolate S2_003_000_R1_2 S2_003_000_R1_scaffold_53189, whole genome shotgun sequence (1232 bp)
Overview 1 RT 1: 1-994 bp Neighborhood of RT #1 [1, 1161] RVT-GII GIIM Feature: gene Location: 1-1161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127-712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127-712 bp Feature: domain Description: GIIM Note: maturase Location: 766-994 bp Feature: domain Description: GIIM Note: maturase Location: 76 6 -994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)