myRT

myRT report for GCA_003243895.1_ASM324389v1

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Seq: QHCB01000127.1 Pseudonocardiales bacterium isolate RRmetagenome_bin5 25913.lane1.1__paired__contig_19423, whole genome shotgun sequence (43159 bp)
Overview 1 RT 1: 1387-5451 bp Neighborhood of RT #1 [1387, 5451] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Feature: gene Location: 1387-1668 bp Feature: domain Description: Cas2_I_II_III Location: 1402-1627 bp Feature: domain Description: Cas2_I_II_III Location: 1 402-1 627 bp Feature: gene Location: 1659-3176 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1674-2118 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 674-21 1 8 bp Feature: domain Description: Cas1_I-II-III Location: 2187-3135 bp Feature: domain Description: Cas1 _I-II-III Location: 21 87-31 35 bp Feature: gene Location: 3518-5041 bp Feature: gene Location: 5038-5451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: QHCB01000150.1 Pseudonocardiales bacterium isolate RRmetagenome_bin5 25913.lane1.1__paired__contig_21879, whole genome shotgun sequence (7874 bp)
Overview 1 RT 1: 1-2900 bp Neighborhood of RT #1 [1, 2900] RVT-GII GIIM M20_dipept_like Feature: gene Location: 1-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118-745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118-745 bp Feature: domain Description: GIIM Note: maturase Location: 835-1042 bp Feature: domain Description: GIIM Note: maturase Location: 835-1042 bp Feature: gene Location: 1250-2653 bp Feature: domain Description: M20_dipept_like Location: 1301-2612 bp Feature: domain Description: M2 0_dipept_like Location: 1301-2 612 bp Feature: gene Location: 2766-2900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), M20_dipept_like (cd05680)

Seq: QHCB01000177.1 Pseudonocardiales bacterium isolate RRmetagenome_bin5 25913.lane1.1__paired__contig_24779, whole genome shotgun sequence (21204 bp)
Overview 1 RT 1: 7671-11684 bp Neighborhood of RT #1 [7671, 11737] DUF4229 DUF1707 RVT-Retrons SuhB PBP2_Sco4506 Feature: gene Location: 7671-7985 bp Feature: domain Description: DUF4229 Location: 7746-7923 bp Feature: domain Description: DUF4229 Location: 7746-7923 bp Feature: gene Location: 8018-8521 bp Feature: domain Description: DUF1707 Location: 8087-8243 bp Feature: domain Description: DUF1707 Location: 8087-8243 bp Feature: gene Location: 8531-9859 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8981-9614 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8981-9614 bp Feature: gene Location: 10057-10809 bp Feature: domain Description: SuhB Location: 10075-10783 bp Feature: domain Description: SuhB Location: 10075-10783 bp Feature: gene Location: 10895-11737 bp Feature: domain Description: PBP2_Sco4506 Location: 10916-11684 bp Feature: domain Description: PBP2_Sco4506 Location: 10916-11684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4229 (pfam14012), DUF1707 (pfam08044), RVT-Retrons, SuhB (COG0483), PBP2_Sco4506 (cd13634)

Seq: QHCB01000221.1 Pseudonocardiales bacterium isolate RRmetagenome_bin5 25913.lane1.1__paired__contig_29829, whole genome shotgun sequence (2126 bp)
Overview 1 RT 1: 103-2120 bp Neighborhood of RT #1 [103, 2125] DDE_Tnp_ISAZ013 RVT_N RVT-GII Feature: gene Location: 103-732 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 373-667 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 373-667 bp Feature: gene Location: 1094-1288 bp Feature: gene Location: 1352-2125 bp Feature: domain Description: RVT_N Location: 1397-1637 bp Feature: domain Description: RVT_N Location: 1397-1637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1694-2120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1694 -2120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT_N (pfam13655), RVT-GII

Seq: QHCB01000312.1 Pseudonocardiales bacterium isolate RRmetagenome_bin5 25913.lane1.1__paired__contig_43949, whole genome shotgun sequence (2187 bp)
Overview 1 RT 1: 82-1868 bp Neighborhood of RT #1 [82, 1868] RVT-GII GIIM Feature: gene Location: 82-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85-514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 -5 14 bp Feature: domain Description: GIIM Note: maturase Location: 586-787 bp Feature: domain Description: GIIM Note: maturase Location: 5 86-787 bp Feature: gene Location: 1361-1510 bp Feature: gene Location: 1599-1868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QHCB01000321.1 Pseudonocardiales bacterium isolate RRmetagenome_bin5 25913.lane1.1__paired__contig_45702, whole genome shotgun sequence (2301 bp)
Overview 1 RT 1: 2-2301 bp Neighborhood of RT #1 [2, 2300] RVT-GII GIIM RVT-GII Feature: gene Location: 2-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38-248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38-248 bp Feature: domain Description: GIIM Note: maturase Location: 299-533 bp Feature: domain Description: GIIM Note: maturase Location: 299-533 bp Feature: gene Location: 1567-1725 bp Feature: gene Location: 1764-2300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2079-2301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2079-2301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)