myRT

myRT report for GCA_003244255.1_ASM324425v1

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Seq: QHCD01000035.1 Pseudonocardiales bacterium isolate RRmetagenome_bin3 antarctic_groopm_ref2_bin_330_contig_239, whole genome shotgun sequence (67052 bp)
Overview 1 RT 1: 57587-64791 bp Neighborhood of RT #1 [57587, 64937] SdrC PRK00068 RVT-UG23 HTH_17 PRK13889 Feature: gene Location: 57587-58603 bp Feature: domain Description: SdrC Location: 57596-58601 bp Feature: domain Description: SdrC Location: 57596-58601 bp Feature: gene Location: 58638-61544 bp Feature: domain Description: PRK00068 Location: 58647-61506 bp Feature: domain Description: PRK00068 Location: 58647-61 506 bp Feature: gene Location: 62019-63554 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 62217-62856 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 6221 7-62856 bp Feature: gene Location: 63730-63966 bp Feature: domain Description: HTH_17 Location: 63817-63919 bp Feature: domain Description: HTH_1 7 Location: 6381 7-6391 9 bp Feature: gene Location: 63978-64937 bp Feature: domain Description: PRK13889 Location: 63984-64791 bp Feature: domain Description: PRK1 3889 Location: 63984-64791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SdrC (COG3480), PRK00068 (hypothetical protein; Validated), RVT-UG23, HTH_17 (pfam12728), PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: QHCD01000081.1 Pseudonocardiales bacterium isolate RRmetagenome_bin3 antarctic_groopm_ref2_bin_330_contig_7632, whole genome shotgun sequence (20784 bp)
Overview 1 RT 1: 14239-20741 bp Neighborhood of RT #1 [14239, 20782] PRK10867 Met_dep_hydrolase_A RVT-Retrons PRK08661 rpsP Feature: gene Location: 14239-15774 bp Feature: domain Description: PRK10867 Location: 14242-15577 bp Feature: domain Description: PRK10867 Location: 142 42 -15577 bp Feature: gene Location: 15771-16850 bp Feature: domain Description: Met_dep_hydrolase_A Location: 15897-16806 bp Feature: domain Description: Met_dep_hydrolase_A Location: 15897-16806 bp Feature: gene Location: 17118-18503 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17640-18270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17640-182 70 bp Feature: gene Location: 17078-19966 bp Feature: domain Description: PRK08661 Location: 18575-19964 bp Feature: domain Description: PRK08661 Location: 18575-19964 bp Feature: gene Location: 20306-20782 bp Feature: domain Description: rpsP Location: 20309-20741 bp Feature: domain Description: rpsP Location: 2 0309-2 0741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10867 (signal recognition particle protein; Provisional), Met_dep_hydrolase_A (cd01299), RVT-Retrons, PRK08661 (prolyl-tRNA synthetase; Provisional), rpsP (PRK14525)