myRT

myRT report for GCA_003245515.1_ASM324551v1

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Seq: QKCZ01000180.1 Clostridia bacterium isolate SZUA-437 scaffold_101207, whole genome shotgun sequence (4465 bp)
Overview 1 RT 1: 894-4218 bp Neighborhood of RT #1 [894, 4463] Amidoligase_2 RVT-GII PRK10458 Feature: gene Location: 894-1808 bp Feature: domain Description: Amidoligase_2 Location: 921-1617 bp Feature: domain Description: Amidoligase_2 Location: 921 -1 61 7 bp Feature: gene Location: 2340-2504 bp Feature: gene Location: 2480-3745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2729-3392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2729-3392 bp Feature: gene Location: 3888-4463 bp Feature: domain Description: PRK10458 Location: 3984-4218 bp Feature: domain Description: PRK1 0458 Location: 3984-421 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Amidoligase_2 (pfam12224), RVT-GII, PRK10458 (DNA cytosine methylase; Provisional)

Seq: QKCZ01000005.1 Clostridia bacterium isolate SZUA-437 scaffold_154927, whole genome shotgun sequence (3482 bp)
Overview 1 RT 1: 643-3472 bp Neighborhood of RT #1 [643, 3480] INT_RitB_C_like xerS INT_RitA_C_like RVT-GII Feature: gene Location: 643-1572 bp Feature: domain Description: INT_RitB_C_like Location: 922-1504 bp Feature: domain Description: INT_RitB_C_like Location: 92 2 -1504 bp Feature: gene Location: 1622-2857 bp Feature: domain Description: xerS Location: 1985-2099 bp Feature: domain Description: xerS Location: 1985-2 099 bp Feature: domain Description: INT_RitA_C_like Location: 2291-2828 bp Feature: domain Description: INT_RitA_C_like Location: 2 2 91-2 82 8 bp Feature: gene Location: 3007-3480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3088-3472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3088-3472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), xerS (PRK05084), INT_RitA_C_like (cd01188), RVT-GII

Seq: QKCZ01000512.1 Clostridia bacterium isolate SZUA-437 scaffold_182320, whole genome shotgun sequence (3164 bp)
Overview 1 RT 1: 1551-3154 bp Neighborhood of RT #1 [1551, 3162] ANK ANK ANK RVT-UG17 Feature: gene Location: 1551-2093 bp Feature: domain Description: ANK Location: 1635-1767 bp Feature: domain Description: ANK Location: 163 5-1767 bp Feature: domain Description: ANK Location: 1851-2040 bp Feature: domain Description: ANK Location: 1851-2040 bp Feature: gene Location: 2084-2305 bp Feature: domain Description: ANK Location: 2090-2300 bp Feature: domain Description: ANK Location: 2090-23 00 bp Feature: gene Location: 2437-3162 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2674-3154 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2674-3 154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANK (smart00248), RVT-UG17

Seq: QKCZ01000231.1 Clostridia bacterium isolate SZUA-437 scaffold_29136, whole genome shotgun sequence (9130 bp)
Overview 1 RT 1: 4568-8114 bp Neighborhood of RT #1 [4568, 8114] TerY PTC1 RVT-GII GIIM PTC1 Feature: gene Location: 4568-5197 bp Feature: domain Description: TerY Location: 4592-5087 bp Feature: domain Description: TerY Location: 4 592-5087 bp Feature: gene Location: 5299-5616 bp Feature: domain Description: PTC1 Location: 5383-5605 bp Feature: domain Description: PTC1 Location: 5383-5605 bp Feature: gene Location: 6180-7529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6426-7041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 26-704 1 bp Feature: domain Description: GIIM Note: maturase Location: 7098-7329 bp Feature: domain Description: GIIM Note: maturase Location: 7098-7329 bp Feature: gene Location: 7559-7909 bp Feature: domain Description: PTC1 Location: 7568-7889 bp Feature: domain Description: PTC1 Location: 7568-7889 bp Feature: gene Location: 7890-8114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TerY (COG4245), PTC1 (COG0631), RVT-GII, GIIM (pfam08388)

Seq: QKCZ01000449.1 Clostridia bacterium isolate SZUA-437 scaffold_43382, whole genome shotgun sequence (7294 bp)
Overview 1 RT 1: 2-5622 bp Neighborhood of RT #1 [2, 5630] RVT-GII GIIM COG3459 Feature: gene Location: 2-136 bp Feature: gene Location: 554-1966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905-1523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905 -15 23 bp Feature: domain Description: GIIM Note: maturase Location: 1577-1802 bp Feature: domain Description: GIIM Note: maturase Location: 15 77-1802 bp Feature: gene Location: 2106-2810 bp Feature: gene Location: 3192-5630 bp Feature: domain Description: COG3459 Location: 3195-5622 bp Feature: domain Description: COG345 9 Location: 3195 -5 622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3459 (Cellobiose phosphorylase )