myRT

myRT report for GCA_003245575.1_ASM324557v1

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Seq: QKCR01000034.1 Alphaproteobacteria bacterium isolate SZUA-429 scaffold_110066, whole genome shotgun sequence (4249 bp)
Overview 1 RT 1: 2-3982 bp Neighborhood of RT #1 [2, 4011] RVT-GII GIIM PinE Zn_ribbon_recom HTH_17 HTH_17 Feature: gene Location: 2-328 bp Feature: gene Location: 468-1256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471-834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 -834 bp Feature: domain Description: GIIM Note: maturase Location: 885-1116 bp Feature: domain Description: GIIM Note: maturase Location: 885-1 1 1 6 bp Feature: gene Location: 1431-1568 bp Feature: gene Location: 1807-4011 bp Feature: domain Description: PinE Location: 1852-2419 bp Feature: domain Description: PinE Location: 1 852-241 9 bp Feature: domain Description: Zn_ribbon_recom Location: 2800-2968 bp Feature: domain Description: Zn_ribbon_recom Location: 2800-2968 bp Feature: domain Description: HTH_17 Location: 3682-3808 bp Feature: domain Description: HTH_1 7 Location: 3682-3808 bp Feature: domain Description: HTH_17 Location: 3853-3982 bp Feature: domain Description: HTH_1 7 Location: 3853-3982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388)

Seq: QKCR01000152.1 Alphaproteobacteria bacterium isolate SZUA-429 scaffold_120664, whole genome shotgun sequence (4029 bp)
Overview 1 RT 1: 550-3841 bp Neighborhood of RT #1 [550, 3867] group_II_RT_mat Resolvase Recombinase Zn_ribbon_recom RVT-GII Feature: gene Location: 550-1140 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 556-898 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 556-898 bp Feature: gene Location: 1232-2896 bp Feature: domain Description: Resolvase Location: 1271-1706 bp Feature: domain Description: Resolvase Location: 12 71-1706 bp Feature: domain Description: Recombinase Location: 1790-2156 bp Feature: domain Description: Recombinase Location: 1790-2 156 bp Feature: domain Description: Zn_ribbon_recom Location: 2198-2390 bp Feature: domain Description: Zn_ribbon_recom Location: 2 198-2 390 bp Feature: gene Location: 3136-3867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3448-3841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3448-3841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, group_II_RT_mat (TIGR04416)