myRT

myRT report for GCA_003246275.1_ASM324627v1

Download annotations/find similar RTs

Seq: QKAT01000361.1 Bryobacteraceae bacterium isolate SZUA-379 scaffold_160156, whole genome shotgun sequence (3416 bp)
Overview 1 RT 1: 241-3117 bp Neighborhood of RT #1 [241, 3176] RVT-GII GIIM HTH_23 DDE_3 Feature: gene Location: 241-1578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604-1225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604-1 225 bp Feature: domain Description: GIIM Note: maturase Location: 1267-1468 bp Feature: domain Description: GIIM Note: maturase Location: 1 267-1 468 bp Feature: gene Location: 1628-1813 bp Feature: gene Location: 2148-3176 bp Feature: domain Description: HTH_23 Location: 2226-2364 bp Feature: domain Description: HTH_23 Location: 2226-2364 bp Feature: domain Description: DDE_3 Location: 2691-3117 bp Feature: domain Description: DDE_3 Location: 2691 -31 1 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_23 (pfam13384), DDE_3 (pfam13358)

Seq: QKAT01000342.1 Bryobacteraceae bacterium isolate SZUA-379 scaffold_186013, whole genome shotgun sequence (3125 bp)
Overview 1 RT 1: 2-2956 bp Neighborhood of RT #1 [2, 2979] RVT-GII MviM MviM PmoA Feature: gene Location: 2-565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 -560 bp Feature: gene Location: 697-2010 bp Feature: domain Description: MviM Location: 796-1255 bp Feature: domain Description: MviM Location: 796-12 55 bp Feature: domain Description: MviM Location: 1369-1804 bp Feature: domain Description: MviM Location: 1369-1804 bp Feature: gene Location: 2014-2979 bp Feature: domain Description: PmoA Location: 2113-2956 bp Feature: domain Description: PmoA Location: 2 113-2 956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MviM (COG0673), PmoA (pfam14100)

Seq: QKAT01000109.1 Bryobacteraceae bacterium isolate SZUA-379 scaffold_244070, whole genome shotgun sequence (2657 bp)
Overview 1 RT 1: 590-2320 bp Neighborhood of RT #1 [590, 2418] RVT-GII GIIM Feature: gene Location: 590-874 bp Feature: gene Location: 877-1134 bp Feature: gene Location: 1102-2418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390-2014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 90-2014 bp Feature: domain Description: GIIM Note: maturase Location: 2110-2320 bp Feature: domain Description: GIIM Note: maturase Location: 2110-23 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QKAT01000460.1 Bryobacteraceae bacterium isolate SZUA-379 scaffold_246324, whole genome shotgun sequence (2642 bp)
Overview 1 RT 1: 1302-2488 bp Neighborhood of RT #1 [1302, 2640] RVT-GII Feature: gene Location: 1302-1478 bp Feature: gene Location: 1644-1829 bp Feature: gene Location: 1834-2640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1837-2488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1837-24 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII