myRT

myRT report for GCA_003246295.1_ASM324629v1

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Seq: QKAS01000007.1 Clostridia bacterium isolate SZUA-378 scaffold_26588, whole genome shotgun sequence (19611 bp)
Overview 1 RT 1: 13199-17556 bp Neighborhood of RT #1 [13199, 17591] HTH_17 RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 13199-13405 bp Feature: domain Description: HTH_17 Location: 13214-13334 bp Feature: domain Description: HTH_1 7 Location: 1 321 4-1 3334 bp Feature: gene Location: 13777-13905 bp Feature: gene Location: 14284-15525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14488-15145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4488-1 51 45 bp Feature: domain Description: GIIM Note: maturase Location: 15226-15448 bp Feature: domain Description: GIIM Note: maturase Location: 1 5226-1 5448 bp Feature: gene Location: 15667-17205 bp Feature: domain Description: LZ_Tnp_IS66 Location: 15739-15955 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 5739-1 5955 bp Feature: domain Description: zf-IS66 Location: 15988-16117 bp Feature: domain Description: zf-IS66 Location: 1 5988-1 61 1 7 bp Feature: domain Description: DDE_Tnp_IS66 Location: 16180-17035 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 61 80-1 7035 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 17053-17176 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 7053-1 71 76 bp Feature: gene Location: 17292-17591 bp Feature: domain Description: TnpB_IS66 Location: 17295-17556 bp Feature: domain Description: TnpB_IS66 Location: 1 7295-1 7556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)