myRT

myRT report for GCA_003248335.1_ASM324833v1

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Seq: QKWX01000002.1 Streptomyces sp. AC1-42T contig2, whole genome shotgun sequence (2461044 bp)
Overview 1 RT 1: 1163199-1170323 bp Neighborhood of RT #1 [1163199, 1170442] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cas6 RAMP_I_III RAMP_I_III Feature: gene Location: 1163199-1163621 bp Feature: gene Location: 1164950-1165243 bp Feature: domain Description: Cas2_I_II_III Location: 1164977-1165205 bp Feature: domain Description: Cas2_I_II_III Location: 1 1 64977-1 1 65205 bp Feature: gene Location: 1165240-1167114 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1165450-1166056 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 1 65450-1 1 66056 bp Feature: domain Description: Cas1_I-II-III Location: 1166125-1167073 bp Feature: domain Description: Cas1 _I-II-III Location: 1 1 661 25-1 1 67073 bp Feature: gene Location: 1167802-1168560 bp Feature: domain Description: Cas6 Location: 1168144-1168510 bp Feature: domain Description: Cas6 Location: 1 1 681 44-1 1 6851 0 bp Feature: gene Location: 1169030-1170442 bp Feature: domain Description: RAMP_I_III Location: 1169123-1169582 bp Feature: domain Description: RAMP_I_III Location: 1 1 691 23-1 1 69582 bp Feature: domain Description: RAMP_I_III Location: 1169840-1170323 bp Feature: domain Description: RAMP_I_III Location: 1 1 69840-1 1 70323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas6 (pfam09559), RAMP_I_III (cl21471)

Seq: QKWX01000004.1 Streptomyces sp. AC1-42T contig4, whole genome shotgun sequence (279739 bp)
Overview 1 RT 1: 55896-60431 bp Neighborhood of RT #1 [55896, 60436] mmdA HTH_23 Tra8 RVT_N RVT-GII mmdA ACC_epsilon Feature: gene Location: 55896-56954 bp Feature: domain Description: mmdA Location: 55899-56949 bp Feature: domain Description: mmdA Location: 55899-56949 bp Feature: gene Location: 57152-57895 bp Feature: domain Description: HTH_23 Location: 57158-57212 bp Feature: domain Description: HTH_2 3 Location: 57158-572 12 bp Feature: domain Description: Tra8 Location: 57305-57851 bp Feature: domain Description: Tra8 Location: 57305-57851 bp Feature: gene Location: 58517-59389 bp Feature: domain Description: RVT_N Location: 58601-58838 bp Feature: domain Description: RVT_N Location: 58601-58838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58898-59345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58898-59345 bp Feature: gene Location: 59556-60050 bp Feature: domain Description: mmdA Location: 59565-60021 bp Feature: domain Description: mmdA Location: 59565-6002 1 bp Feature: gene Location: 60230-60436 bp Feature: domain Description: ACC_epsilon Location: 60257-60431 bp Feature: domain Description: ACC_epsilon Location: 602 57-60431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mmdA (TIGR01117), HTH_23 (pfam13384), Tra8 (COG2826), RVT_N (pfam13655), RVT-GII, ACC_epsilon (pfam13822)