myRT

myRT report for GCA_003248355.1_ASM324835v1

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Seq: QKWY01000001.1 Streptomyces sp. AC1-42W contig1, whole genome shotgun sequence (3945785 bp)
Overview 1 RT 1: 2768278-2775521 bp Neighborhood of RT #1 [2768278, 2775521] RAMP_I_III RAMP_I_III Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 2768278-2769690 bp Feature: domain Description: RAMP_I_III Location: 2768371-2768830 bp Feature: domain Description: RAMP_I_III Location: 2768371 -2768830 bp Feature: domain Description: RAMP_I_III Location: 2769088-2769571 bp Feature: domain Description: RAMP_I_III Location: 2769088-2769571 bp Feature: gene Location: 2770160-2770918 bp Feature: domain Description: Cas6 Location: 2770502-2770868 bp Feature: domain Description: Cas6 Location: 2770502-2770868 bp Feature: gene Location: 2771606-2773480 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2771816-2772422 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2771 81 6-2772422 bp Feature: domain Description: Cas1_I-II-III Location: 2772491-2773439 bp Feature: domain Description: Cas1 _I-II-III Location: 2772491 -2773439 bp Feature: gene Location: 2773477-2773770 bp Feature: domain Description: Cas2_I_II_III Location: 2773504-2773732 bp Feature: domain Description: Cas2_I_II_III Location: 2773504-2773732 bp Feature: gene Location: 2775099-2775521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAMP_I_III (cl21471), Cas6 (pfam09559), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: QKWY01000003.1 Streptomyces sp. AC1-42W contig3, whole genome shotgun sequence (287163 bp)
Overview 1 RT 1: 213411-217946 bp Neighborhood of RT #1 [213411, 217951] ACC_epsilon mmdA RVT_N RVT-GII HTH_23 Tra8 mmdA Feature: gene Location: 213411-213617 bp Feature: domain Description: ACC_epsilon Location: 213438-213612 bp Feature: domain Description: ACC_epsilon Location: 2 13438-2 13612 bp Feature: gene Location: 213737-214291 bp Feature: domain Description: mmdA Location: 213794-214262 bp Feature: domain Description: mmdA Location: 2 13794-2 142 62 bp Feature: gene Location: 214458-215330 bp Feature: domain Description: RVT_N Location: 214542-214779 bp Feature: domain Description: RVT_N Location: 2 14542 -2 14779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214839-215286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 14839-2 152 86 bp Feature: gene Location: 215952-216695 bp Feature: domain Description: HTH_23 Location: 215958-216012 bp Feature: domain Description: HTH_2 3 Location: 2 15958-2 16012 bp Feature: domain Description: Tra8 Location: 216105-216651 bp Feature: domain Description: Tra8 Location: 2 16105-2 16651 bp Feature: gene Location: 216893-217951 bp Feature: domain Description: mmdA Location: 216896-217946 bp Feature: domain Description: mmdA Location: 2 16896-2 17946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACC_epsilon (pfam13822), mmdA (TIGR01117), RVT_N (pfam13655), RVT-GII, HTH_23 (pfam13384), Tra8 (COG2826)