myRT

myRT report for GCA_003253485.1_ASM325348v1

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Seq: QKTX01000001.1 Algoriphagus aquaeductus strain T4 Ga0180997_101, whole genome shotgun sequence (550805 bp)
Overview 1 RT 1: 172867-177979 bp Neighborhood of RT #1 [172867, 177979] ResIII SSL2 LprI RVT-Retrons HTH_XRE Feature: gene Location: 172867-175476 bp Feature: domain Description: ResIII Location: 172870-173593 bp Feature: domain Description: ResIII Location: 1 72870-1 73593 bp Feature: domain Description: SSL2 Location: 173818-174094 bp Feature: domain Description: SSL2 Location: 1 7381 8-1 74094 bp Feature: gene Location: 175527-176501 bp Feature: domain Description: LprI Location: 176223-176358 bp Feature: domain Description: LprI Location: 1 76223-1 76358 bp Feature: gene Location: 176542-177390 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 176710-177229 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 7671 0-1 77229 bp Feature: gene Location: 177387-177692 bp Feature: domain Description: HTH_XRE Location: 177399-177558 bp Feature: domain Description: HTH_XRE Location: 1 77399-1 77558 bp Feature: gene Location: 177728-177979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ResIII (pfam04851), SSL2 (COG1061), LprI (pfam07007), RVT-Retrons, HTH_XRE (smart00530)

Seq: QKTX01000002.1 Algoriphagus aquaeductus strain T4 Ga0180997_102, whole genome shotgun sequence (467537 bp)
Overview 1 RT 1: 272884-278303 bp Neighborhood of RT #1 [272884, 278338] DUF1016_N YhcG_C RVT-Retrons WYL DUF4349 Feature: gene Location: 272884-273882 bp Feature: domain Description: DUF1016_N Location: 272914-273316 bp Feature: domain Description: DUF1016_N Location: 2 72 914-2 73316 bp Feature: domain Description: YhcG_C Location: 273391-273853 bp Feature: domain Description: YhcG_C Location: 2 73391-2 73853 bp Feature: gene Location: 273912-274640 bp Feature: gene Location: 274642-276015 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 274930-275605 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 74930-2 75605 bp Feature: gene Location: 276441-277493 bp Feature: domain Description: WYL Location: 276960-277476 bp Feature: domain Description: WYL Location: 2 76960-2 77476 bp Feature: gene Location: 277523-278338 bp Feature: domain Description: DUF4349 Location: 277694-278303 bp Feature: domain Description: DUF4349 Location: 2 77694-2 78303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1016_N (pfam17761), YhcG_C, RVT-Retrons, WYL (pfam13280), DUF4349 (pfam14257)