myRT

myRT report for GCA_003253655.1_ASM325365v1

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Seq: QKZA01000003.1 Fibrobacter sp. UWR1 Ga0197329_1003, whole genome shotgun sequence (138724 bp)
Overview 1 RT 1: 130874-135029 bp Neighborhood of RT #1 [130874, 135029] Fib_succ_major Avd_like RVT-DGRs Feature: gene Location: 130874-131740 bp Feature: domain Description: Fib_succ_major Location: 131246-131735 bp Feature: domain Description: Fib_succ_major Location: 1 31 246-1 31 735 bp Feature: gene Location: 131876-132661 bp Feature: domain Description: Avd_like Location: 132296-132575 bp Feature: domain Description: Avd_like Location: 1 32296-1 32575 bp Feature: gene Location: 132869-134035 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 133139-133844 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 331 39-1 33844 bp Feature: gene Location: 134157-134645 bp Feature: gene Location: 134664-135029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), Avd_like (cd16376), RVT-DGRs

Seq: QKZA01000005.1 Fibrobacter sp. UWR1 Ga0197329_1005, whole genome shotgun sequence (134920 bp)
Overview 1 RT 1: 61711-68241 bp Neighborhood of RT #1 [61711, 68249] CBM_4_9 Glyco_10 Fib_succ_major RVT-DGRs Avd_like Fib_succ_major Feature: gene Location: 61711-63516 bp Feature: domain Description: CBM_4_9 Location: 61918-62287 bp Feature: domain Description: CBM_4_9 Location: 61918-62 2 87 bp Feature: domain Description: Glyco_10 Location: 62611-63370 bp Feature: domain Description: Glyco_10 Location: 62 611-63370 bp Feature: gene Location: 63891-64757 bp Feature: gene Location: 64849-66312 bp Feature: domain Description: Fib_succ_major Location: 64933-65170 bp Feature: domain Description: Fib_succ_major Location: 64933-65170 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65374-66076 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65374-66076 bp Feature: gene Location: 66309-67085 bp Feature: domain Description: Avd_like Location: 66738-67005 bp Feature: domain Description: Avd_like Location: 66738-67005 bp Feature: gene Location: 67326-68249 bp Feature: domain Description: Fib_succ_major Location: 67608-68241 bp Feature: domain Description: Fib_succ_major Location: 67608-682 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CBM_4_9 (pfam02018), Glyco_10 (smart00633), Fib_succ_major (TIGR02145), RVT-DGRs, Avd_like (cd16376)

Seq: QKZA01000006.1 Fibrobacter sp. UWR1 Ga0197329_1006, whole genome shotgun sequence (125132 bp)
Overview 1 RT 1: 39556-46198 bp Neighborhood of RT #1 [39556, 46476] Fib_succ_major Collagen Fib_succ_major RVT-DGRs Avd_like DUF2971 Feature: gene Location: 39556-40542 bp Feature: domain Description: Fib_succ_major Location: 40057-40540 bp Feature: domain Description: Fib_succ_major Location: 40057-40540 bp Feature: gene Location: 40568-43270 bp Feature: domain Description: Collagen Location: 40910-41054 bp Feature: domain Description: Collagen Location: 40910-41054 bp Feature: domain Description: Fib_succ_major Location: 42656-43262 bp Feature: domain Description: Fib_succ_major Location: 42656-43 262 bp Feature: gene Location: 43412-44500 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43622-44324 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43 622-443 24 bp Feature: gene Location: 44503-45219 bp Feature: domain Description: Avd_like Location: 44899-45178 bp Feature: domain Description: Avd_like Location: 44899-45178 bp Feature: gene Location: 45592-46476 bp Feature: domain Description: DUF2971 Location: 45985-46198 bp Feature: domain Description: DUF2971 Location: 45985-46198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), Collagen (pfam01391), RVT-DGRs, Avd_like (cd16376), DUF2971 (pfam11185)

Seq: QKZA01000027.1 Fibrobacter sp. UWR1 Ga0197329_1027, whole genome shotgun sequence (54925 bp)
Overview 1 RT 1: 41277-47297 bp Neighborhood of RT #1 [41277, 47297] Collagen Fib_succ_major Avd_like RVT-DGRs Feature: gene Location: 41277-44342 bp Feature: domain Description: Collagen Location: 41667-41748 bp Feature: domain Description: Collagen Location: 4 1667-4 174 8 bp Feature: domain Description: Fib_succ_major Location: 43767-44334 bp Feature: domain Description: Fib_succ_major Location: 4 3767-4 4 334 bp Feature: gene Location: 44460-45281 bp Feature: domain Description: Avd_like Location: 44928-45207 bp Feature: domain Description: Avd_like Location: 4 4 928-4 5207 bp Feature: gene Location: 45515-46633 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45761-46463 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 5761-4 64 63 bp Feature: gene Location: 46672-46851 bp Feature: gene Location: 46959-47297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Collagen (pfam01391), Fib_succ_major (TIGR02145), Avd_like (cd16376), RVT-DGRs

Seq: QKZA01000049.1 Fibrobacter sp. UWR1 Ga0197329_1049, whole genome shotgun sequence (17918 bp)
Overview 1 RT 1: 41-4631 bp Neighborhood of RT #1 [41, 4648] group_II_RT_mat RVT-UG19 RMtype1_S_StySKI-TRD2-CR2_like RMtype1_S_Vch69ORF1407P_TRD2-CR2_like RMtype1_S_Vch69ORF1407P_TRD2-CR2_like HsdM Feature: gene Location: 41-1840 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 104-383 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 104-383 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 443-932 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 443-932 bp Feature: gene Location: 1864-2985 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 1882-1990 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 1882-1990 bp Feature: domain Description: RMtype1_S_Vch69ORF1407P_TRD2-CR2_like Location: 2143-2398 bp Feature: domain Description: RMtype1_S_Vch69ORF1407P_TRD2-CR2_like Location: 2143-2398 bp Feature: domain Description: RMtype1_S_Vch69ORF1407P_TRD2-CR2_like Location: 2446-2971 bp Feature: domain Description: RMtype1_S_Vch69ORF1407P_TRD2-CR2_like Location: 2446-2971 bp Feature: gene Location: 3122-4648 bp Feature: domain Description: HsdM Location: 3176-4631 bp Feature: domain Description: HsdM Location: 3176-4631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG19, RMtype1_S_StySKI-TRD2-CR2_like (cd17259), RMtype1_S_Vch69ORF1407P_TRD2-CR2_like (cd17501), HsdM (COG0286)