myRT

myRT report for GCA_003253875.1_ASM325387v1

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Seq: QIWA01000030.1 Klebsiella pneumoniae strain WUSM_KP_74 NODE_30_length_61866_cov_48.2538, whole genome shotgun sequence (61866 bp)
Overview 1 RT 1: 49000-52270 bp Neighborhood of RT #1 [49000, 52284] RVT-GII PRK10276 Feature: gene Location: 49000-49215 bp Feature: gene Location: 49482-49712 bp Feature: gene Location: 49946-51457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50351-51065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50351 -51 065 bp Feature: gene Location: 51508-51741 bp Feature: gene Location: 51859-52284 bp Feature: domain Description: PRK10276 Location: 51862-52270 bp Feature: domain Description: PRK1 0276 Location: 51 862-52270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: QIWA01000003.1 Klebsiella pneumoniae strain WUSM_KP_74 NODE_3_length_273751_cov_43.046, whole genome shotgun sequence (273751 bp)
Overview 1 RT 1: 45545-52398 bp Neighborhood of RT #1 [45545, 52415] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 45545-46210 bp Feature: domain Description: INT_P4_C Location: 45650-46208 bp Feature: domain Description: INT_P4_C Location: 45650-462 08 bp Feature: gene Location: 46471-46911 bp Feature: domain Description: Integrase_1 Location: 46477-46693 bp Feature: domain Description: Integrase_1 Location: 46477-46693 bp Feature: gene Location: 46968-49046 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47376-47820 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47376-4782 0 bp Feature: gene Location: 49046-51655 bp Feature: domain Description: FimD Location: 49103-51644 bp Feature: domain Description: FimD Location: 49103-51644 bp Feature: gene Location: 51687-52415 bp Feature: domain Description: FimC Location: 51720-52398 bp Feature: domain Description: FimC Location: 5172 0-52 398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)