myRT

myRT report for GCA_003258475.1_ASM325847v1

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Seq: QKYP01000381.1 Vibrio vulnificus strain CICESE-325 NODE_1083_length_3894_cov_1.032614, whole genome shotgun sequence (3924 bp)
Overview 1 RT 1: 187-3534 bp Neighborhood of RT #1 [187, 3923] Cas2_I_II_III RVT-CRISPR Cas_Cas1 TIGR03986 Feature: gene Location: 187-465 bp Feature: domain Description: Cas2_I_II_III Location: 199-394 bp Feature: domain Description: Cas2_I_II_III Location: 1 99-394 bp Feature: gene Location: 469-3285 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1558-2167 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 558-21 67 bp Feature: domain Description: Cas_Cas1 Location: 2344-3160 bp Feature: domain Description: Cas_Cas1 Location: 2344-31 60 bp Feature: gene Location: 3294-3923 bp Feature: domain Description: TIGR03986 Location: 3297-3534 bp Feature: domain Description: TIGR03986 Location: 3297-3534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas_Cas1 (pfam01867), TIGR03986 (CRISPR-associated protein)

Seq: QKYP01000027.1 Vibrio vulnificus strain CICESE-325 NODE_30_length_14519_cov_1.048488, whole genome shotgun sequence (14549 bp)
Overview 1 RT 1: 404-3452 bp Neighborhood of RT #1 [404, 3589] RVT-Retrons Ntn_CGH Feature: gene Location: 404-1576 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 548-1124 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 548-112 4 bp Feature: gene Location: 1576-2298 bp Feature: gene Location: 2534-3589 bp Feature: domain Description: Ntn_CGH Location: 2543-3452 bp Feature: domain Description: Ntn_CGH Location: 2 543-3452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Ntn_CGH (cd01902)