myRT

myRT report for GCA_003259755.1_ASM325975v1

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Seq: QLMF01000005.1 Rhizobium etli strain R22G Ga0066355_105, whole genome shotgun sequence (339168 bp)
Overview 1 RT 1: 25821-31237 bp Neighborhood of RT #1 [25821, 31237] RVT-UG7 K_oxygenase Feature: gene Location: 25821-26309 bp Feature: gene Location: 26309-27469 bp Feature: gene Location: 27582-29120 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 27960-28383 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 27960-28383 bp Feature: gene Location: 29722-31002 bp Feature: domain Description: K_oxygenase Location: 29983-30562 bp Feature: domain Description: K_oxygenase Location: 29983-30562 bp Feature: gene Location: 31100-31237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, K_oxygenase (pfam13434)

Seq: QLMF01000022.1 Rhizobium etli strain R22G Ga0066355_122, whole genome shotgun sequence (69656 bp)
Overview 1 RT 1: 11839-17088 bp Neighborhood of RT #1 [11839, 17456] VapI FRG RVT-Retrons repA Feature: gene Location: 11839-12210 bp Feature: domain Description: VapI Location: 11938-12181 bp Feature: domain Description: VapI Location: 11938-12 181 bp Feature: gene Location: 12412-13593 bp Feature: domain Description: FRG Location: 12940-13213 bp Feature: domain Description: FRG Location: 12 940-132 13 bp Feature: gene Location: 13881-15593 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13962-14619 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13962 -14619 bp Feature: gene Location: 15771-16058 bp Feature: gene Location: 16272-17456 bp Feature: domain Description: repA Location: 16392-17088 bp Feature: domain Description: repA Location: 16392 -17088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VapI (COG3093), FRG (smart00901), RVT-Retrons, repA

Seq: QLMF01000025.1 Rhizobium etli strain R22G Ga0066355_125, whole genome shotgun sequence (36153 bp)
Overview 1 RT 1: 22-2948 bp Neighborhood of RT #1 [22, 2956] RVT-GII Intron_maturas2 HNHc ArdC Feature: gene Location: 22-1938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-1126 bp Feature: domain Description: Intron_maturas2 Location: 1207-1495 bp Feature: domain Description: Intron_maturas2 Location: 1207-1495 bp Feature: domain Description: HNHc Note: nucleases Location: 1660-1819 bp Feature: domain Description: HNHc Note: nucleases Location: 1660-1819 bp Feature: gene Location: 2181-2531 bp Feature: gene Location: 2552-2956 bp Feature: domain Description: ArdC Location: 2555-2948 bp Feature: domain Description: ArdC Location: 2555-2948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), ArdC (COG4227)

Seq: QLMF01000031.1 Rhizobium etli strain R22G Ga0066355_131, whole genome shotgun sequence (24391 bp)
Overview 1 RT 1: 22-2912 bp Neighborhood of RT #1 [22, 2923] RVT-GII Intron_maturas2 HNHc ArdC Feature: gene Location: 22-1938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-1126 bp Feature: domain Description: Intron_maturas2 Location: 1207-1495 bp Feature: domain Description: Intron_maturas2 Location: 1207-14 95 bp Feature: domain Description: HNHc Note: nucleases Location: 1660-1819 bp Feature: domain Description: HNHc Note: nucleases Location: 1660-1819 bp Feature: gene Location: 2181-2531 bp Feature: gene Location: 2552-2923 bp Feature: domain Description: ArdC Location: 2567-2912 bp Feature: domain Description: ArdC Location: 2567-2912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), ArdC (COG4227)

Seq: QLMF01000037.1 Rhizobium etli strain R22G Ga0066355_137, whole genome shotgun sequence (10748 bp)
Overview 1 RT 1: 32-3060 bp Neighborhood of RT #1 [32, 3071] RVT-GII Intron_maturas2 HNHc ArdC Feature: gene Location: 32-382 bp Feature: gene Location: 625-2541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1729 bp Feature: domain Description: Intron_maturas2 Location: 1810-2098 bp Feature: domain Description: Intron_maturas2 Location: 1810-2098 bp Feature: domain Description: HNHc Note: nucleases Location: 2263-2422 bp Feature: domain Description: HNHc Note: nucleases Location: 2263-2422 bp Feature: gene Location: 2559-2789 bp Feature: gene Location: 2868-3071 bp Feature: domain Description: ArdC Location: 2874-3060 bp Feature: domain Description: ArdC Location: 2874-3060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), ArdC (COG4227)