myRT

myRT report for GCA_003260285.1_ASM326028v1

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Seq: QJOD01000001.1 Salinisphaera halophila strain KSM-18 Contig_12, whole genome shotgun sequence (1614654 bp)
Overview 1 RT 1: 31345-39886 bp 2 RT 2: 1257113-1259141 bp Neighborhood of RT #1 [31345, 39930] PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF DUF4391 RVT-AbiP2 Mod COG3943 Neighborhood of RT #2 [1257113, 1259161] RVT-GII PBP2_OpuAC_like Feature: gene Location: 31345-34566 bp Feature: domain Description: PLDc_N_DEXD_c Location: 31360-31786 bp Feature: domain Description: PLDc_N_DEXD_c Location: 31 360-31 786 bp Feature: domain Description: DEXDc_RapA Location: 32044-32587 bp Feature: domain Description: DEXDc_RapA Location: 32044-32587 bp Feature: domain Description: SF2_C_SNF Location: 33217-33787 bp Feature: domain Description: SF2_C_SNF Location: 3321 7-33787 bp Feature: gene Location: 34566-35354 bp Feature: domain Description: DUF4391 Location: 34590-35292 bp Feature: domain Description: DUF4391 Location: 34590-35292 bp Feature: gene Location: 35347-36864 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35794-36247 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35794-36247 bp Feature: gene Location: 36943-38817 bp Feature: domain Description: Mod Location: 37075-38233 bp Feature: domain Description: Mod Location: 37075-38233 bp Feature: gene Location: 38833-39930 bp Feature: domain Description: COG3943 Location: 38902-39886 bp Feature: domain Description: COG3943 Location: 38902-39886 bp Feature: gene Location: 1257113-1257241 bp Feature: gene Location: 1257284-1257505 bp Feature: gene Location: 1257572-1257862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1257602-1257857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 257602-1 257857 bp Feature: gene Location: 1258032-1258235 bp Feature: gene Location: 1258250-1259161 bp Feature: domain Description: PBP2_OpuAC_like Location: 1258364-1259141 bp Feature: domain Description: PBP2_OpuAC_like Location: 1 258364-1 2591 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793), DUF4391 (pfam14335), RVT-AbiP2, Mod (COG2189), COG3943 (Uncharacterized conserved protein ), RVT-GII, PBP2_OpuAC_like (cd13639)