myRT

myRT report for GCA_003261095.1_ASM326109v1

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Seq: QLNI01000047.1 Desulfobacter hydrogenophilus strain DSM 3380 Ga0150921_1047, whole genome shotgun sequence (36020 bp)
Overview 1 RT 1: 269-5213 bp Neighborhood of RT #1 [269, 5302] RVT-CRISPR Cas1_I-II-III iSH2_PIK3R3 Feature: gene Location: 269-2566 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 479-1100 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 479-1 1 00 bp Feature: domain Description: Cas1_I-II-III Location: 1565-2531 bp Feature: domain Description: Cas1 _I-II-III Location: 1 565-2531 bp Feature: gene Location: 3027-3284 bp Feature: gene Location: 4352-5302 bp Feature: domain Description: iSH2_PIK3R3 Location: 5030-5213 bp Feature: domain Description: iSH2_PIK3R3 Location: 5030-521 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), iSH2_PIK3R3 (cd12925)

Seq: QLNI01000052.1 Desulfobacter hydrogenophilus strain DSM 3380 Ga0150921_1052, whole genome shotgun sequence (30312 bp)
Overview 1 RT 1: 28169-30311 bp Neighborhood of RT #1 [28169, 30311] Avd_like RVT-DGRs Feature: gene Location: 28169-28516 bp Feature: domain Description: Avd_like Location: 28199-28505 bp Feature: domain Description: Avd_like Location: 2 8199-2 8505 bp Feature: gene Location: 28646-28882 bp Feature: gene Location: 29032-30081 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29242-29854 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 92 42 -2 9854 bp Feature: gene Location: 30168-30311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: QLNI01000093.1 Desulfobacter hydrogenophilus strain DSM 3380 Ga0150921_1093, whole genome shotgun sequence (3826 bp)
Overview 1 RT 1: 214-3711 bp Neighborhood of RT #1 [214, 3737] RVT-UG28 FIDO Feature: gene Location: 214-393 bp Feature: gene Location: 494-628 bp Feature: gene Location: 819-2315 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1107-1743 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1107-1743 bp Feature: gene Location: 2479-2808 bp Feature: gene Location: 3441-3737 bp Feature: domain Description: FIDO Location: 3447-3711 bp Feature: domain Description: FIDO Location: 3 447-3 711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, FIDO (COG2184)

Seq: QLNI01000095.1 Desulfobacter hydrogenophilus strain DSM 3380 Ga0150921_1095, whole genome shotgun sequence (3307 bp)
Overview 1 RT 1: 158-1797 bp Neighborhood of RT #1 [158, 2798] RVT-UG3 RVT-UG8 Feature: gene Location: 158-862 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 164-431 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 164 -4 31 bp Feature: gene Location: 855-2798 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1350-1797 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1350-1797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG8

Seq: QLNI01000104.1 Desulfobacter hydrogenophilus strain DSM 3380 Ga0150921_1104, whole genome shotgun sequence (2465 bp)
Overview 1 RT 1: 174-1921 bp Neighborhood of RT #1 [174, 2061] RVT-GII YafD Feature: gene Location: 174-533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-5 16 bp Feature: gene Location: 707-853 bp Feature: gene Location: 958-2061 bp Feature: domain Description: YafD Location: 1003-1921 bp Feature: domain Description: YafD Location: 1003-1921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YafD (COG3021)

Seq: QLNI01000109.1 Desulfobacter hydrogenophilus strain DSM 3380 Ga0150921_1109, whole genome shotgun sequence (1973 bp)
Overview 1 RT 1: 82-1884 bp Neighborhood of RT #1 [82, 1884] RVT-GII GIIM Feature: gene Location: 82-1566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1117 bp Feature: domain Description: GIIM Note: maturase Location: 1165-1366 bp Feature: domain Description: GIIM Note: maturase Location: 116 5-136 6 bp Feature: gene Location: 1657-1884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)