myRT

myRT report for GCA_003261375.1_ASM326137v1

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Seq: CP026857.1 Mannheimia haemolytica strain 12540 chromosome (2606972 bp)
Overview 1 RT 1: 235084-240409 bp 2 RT 2: 1120133-1124529 bp Neighborhood of RT #1 [235084, 240438] PRK00062 RVT-UG2 gram_neg_porins lpxB Neighborhood of RT #2 [1120133, 1124531] GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Feature: gene Location: 235084-236364 bp Feature: domain Description: PRK00062 Location: 235090-236359 bp Feature: domain Description: PRK00062 Location: 235090-236359 bp Feature: gene Location: 236431-236613 bp Feature: gene Location: 236887-237684 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 236941-237652 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 236941 -237652 bp Feature: gene Location: 238032-239189 bp Feature: domain Description: gram_neg_porins Location: 238191-239187 bp Feature: domain Description: gram_neg_porins Location: 2381 91 -2391 87 bp Feature: gene Location: 239197-240438 bp Feature: domain Description: lpxB Location: 239263-240409 bp Feature: domain Description: lpxB Location: 239263-240409 bp Feature: gene Location: 1120133-1120267 bp Feature: gene Location: 1120289-1120903 bp Feature: domain Description: GIIM Note: maturase Location: 1120301-1120484 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 20301 -1 1 20484 bp Feature: domain Description: HNHc Note: nucleases Location: 1120712-1120868 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 2071 2-1 1 20868 bp Feature: gene Location: 1120900-1121364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120906-1121272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 20906-1 1 21 272 bp Feature: gene Location: 1121479-1122009 bp Feature: domain Description: RVT_N Location: 1121548-1121791 bp Feature: domain Description: RVT_N Location: 1 1 21 548-1 1 21 791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1121836-1122004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 21 836-1 1 22004 bp Feature: gene Location: 1123691-1124086 bp Feature: domain Description: rpsI Location: 1123703-1124084 bp Feature: domain Description: rpsI Location: 1 1 23703-1 1 24084 bp Feature: gene Location: 1124103-1124531 bp Feature: domain Description: rplM Location: 1124106-1124529 bp Feature: domain Description: rplM Location: 1 1 241 06-1 1 24529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, gram_neg_porins (cd00342), lpxB (TIGR00215), GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132), rplM (PRK09216)