myRT

myRT report for GCA_003261455.1_ASM326145v1

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Seq: CP026856.1 Pasteurellaceae bacterium 12565 chromosome (2630016 bp)
Overview 1 RT 1: 214424-224723 bp 2 RT 2: 1163193-1167589 bp Neighborhood of RT #1 [214424, 224723] rpoB PRK00566 RVT-UG2 Neighborhood of RT #2 [1163193, 1167591] GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Feature: gene Location: 214424-218449 bp Feature: domain Description: rpoB Location: 214448-218438 bp Feature: domain Description: rpoB Location: 21 4448-21 8438 bp Feature: gene Location: 218712-222995 bp Feature: domain Description: PRK00566 Location: 218748-222837 bp Feature: domain Description: PRK00566 Location: 21 8748-222837 bp Feature: gene Location: 223390-224100 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 223585-224059 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 223585-224059 bp Feature: gene Location: 224146-224538 bp Feature: gene Location: 224541-224723 bp Feature: gene Location: 1163193-1163327 bp Feature: gene Location: 1163349-1163963 bp Feature: domain Description: GIIM Note: maturase Location: 1163361-1163544 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 63361 -1 1 63544 bp Feature: domain Description: HNHc Note: nucleases Location: 1163772-1163928 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 63772-1 1 63928 bp Feature: gene Location: 1163960-1164424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163966-1164332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 63966-1 1 64332 bp Feature: gene Location: 1164539-1165069 bp Feature: domain Description: RVT_N Location: 1164608-1164851 bp Feature: domain Description: RVT_N Location: 1 1 64608-1 1 64851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164896-1165064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 64896-1 1 65064 bp Feature: gene Location: 1166751-1167146 bp Feature: domain Description: rpsI Location: 1166763-1167144 bp Feature: domain Description: rpsI Location: 1 1 66763-1 1 671 44 bp Feature: gene Location: 1167163-1167591 bp Feature: domain Description: rplM Location: 1167166-1167589 bp Feature: domain Description: rplM Location: 1 1 671 66-1 1 67589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132), rplM (PRK09216)