myRT

myRT report for GCA_003261865.1_ASM326186v1

Download annotations/find similar RTs

Seq: QJNC01000114.1 Klebsiella pneumoniae strain WCHKP015637, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1 1 54 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QJNC01000030.1 Klebsiella pneumoniae strain WCHKP015637, whole genome shotgun sequence (67014 bp)
Overview 1 RT 1: 54547-60354 bp Neighborhood of RT #1 [54547, 60884] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 54547-54852 bp Feature: gene Location: 55731-58007 bp Feature: domain Description: AAA_15 Location: 55764-56772 bp Feature: domain Description: AAA_15 Location: 55764-56772 bp Feature: gene Location: 58122-59222 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58305-58833 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58305-58833 bp Feature: gene Location: 59475-59711 bp Feature: gene Location: 59781-60884 bp Feature: domain Description: STKc_PknB_like Location: 59913-60354 bp Feature: domain Description: STKc_PknB_like Location: 59913-60354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: QJNC01000077.1 Klebsiella pneumoniae strain WCHKP015637, whole genome shotgun sequence (10690 bp)
Overview 1 RT 1: 7185-10625 bp Neighborhood of RT #1 [7185, 10625] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7185-7607 bp Feature: domain Description: DUF1380 Location: 7188-7482 bp Feature: domain Description: DUF13 80 Location: 7188-7482 bp Feature: gene Location: 7604-7795 bp Feature: gene Location: 8109-9776 bp Feature: RT Description: RVT_N Location: 8157-8394 bp Feature: RT Description: RVT_N Location: 8157-83 94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8445-9087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8445-9087 bp Feature: domain Description: GIIM Note: maturase Location: 9138-9372 bp Feature: domain Description: GIIM Note: maturase Location: 913 8-93 72 bp Feature: domain Description: HNHc Note: nucleases Location: 9582-9741 bp Feature: domain Description: HNHc Note: nucleases Location: 9582-9741 bp Feature: gene Location: 10056-10238 bp Feature: gene Location: 10350-10625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)