myRT

myRT report for GCA_003263795.1_ASM326379v1

Download annotations/find similar RTs

Seq: JYJL01000585.1 Vibrio mediterranei strain CAIM 316 contig00588, whole genome shotgun sequence (4119 bp)
Overview 1 RT 1: 1853-4118 bp Neighborhood of RT #1 [1853, 4118] RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 1853-1990 bp Feature: gene Location: 2042-2197 bp Feature: gene Location: 2268-3119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2274-2610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2274-261 0 bp Feature: domain Description: GIIM Note: maturase Location: 2670-2895 bp Feature: domain Description: GIIM Note: maturase Location: 2670-2895 bp Feature: gene Location: 3101-3739 bp Feature: domain Description: RVT_N Location: 3149-3392 bp Feature: domain Description: RVT_N Location: 31 49-3392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3437-3656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3437-3656 bp Feature: gene Location: 3963-4118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: JYJL01000677.1 Vibrio mediterranei strain CAIM 316 contig00680, whole genome shotgun sequence (9892 bp)
Overview 1 RT 1: 5145-9835 bp Neighborhood of RT #1 [5145, 9879] RVT-UG8 RVT-UG3 Mob_Pre Feature: gene Location: 5145-5339 bp Feature: gene Location: 5351-5662 bp Feature: gene Location: 5960-7381 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5966-6377 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5966-6377 bp Feature: gene Location: 7513-7692 bp Feature: gene Location: 7730-7984 bp Feature: gene Location: 7985-8266 bp Feature: gene Location: 8325-9212 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8607-9084 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8607-9084 bp Feature: gene Location: 9368-9559 bp Feature: gene Location: 9613-9879 bp Feature: domain Description: Mob_Pre Location: 9616-9835 bp Feature: domain Description: Mob_Pre Location: 9616-9835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, Mob_Pre (pfam01076)

Seq: JYJL01001635.1 Vibrio mediterranei strain CAIM 316 contig01658, whole genome shotgun sequence (8944 bp)
Overview 1 RT 1: 1857-5463 bp Neighborhood of RT #1 [1857, 5463] Integrase_1 RVT-GII GIIM RVT_N Feature: gene Location: 1857-2714 bp Feature: domain Description: Integrase_1 Location: 2118-2514 bp Feature: domain Description: Integrase_1 Location: 2118-2514 bp Feature: gene Location: 2756-3088 bp Feature: gene Location: 3747-4841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750-4332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 750-43 3 2 bp Feature: domain Description: GIIM Note: maturase Location: 4389-4617 bp Feature: domain Description: GIIM Note: maturase Location: 43 89-4617 bp Feature: gene Location: 4929-5117 bp Feature: domain Description: RVT_N Location: 4935-5064 bp Feature: domain Description: RVT_N Location: 493 5-5064 bp Feature: gene Location: 5140-5463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)