myRT

myRT report for GCA_003265145.1_ASM326514v1

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Seq: ATCT01000008.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_c16, whole genome shotgun sequence (41965 bp)
Overview 1 RT 1: 37355-41943 bp Neighborhood of RT #1 [37355, 41963] sensory_box sensory_box PocR sensory_box PAS HDGYP RVT-GII Feature: gene Location: 37355-40006 bp Feature: domain Description: sensory_box Location: 37364-37709 bp Feature: domain Description: sensory_box Location: 37364-37709 bp Feature: domain Description: sensory_box Location: 37736-38078 bp Feature: domain Description: sensory_box Location: 37736-38078 bp Feature: domain Description: PocR Location: 38165-38642 bp Feature: domain Description: PocR Location: 381 65-38642 bp Feature: domain Description: sensory_box Location: 38714-39065 bp Feature: domain Description: sensory_box Location: 3871 4-39065 bp Feature: domain Description: PAS Location: 39113-39233 bp Feature: domain Description: PAS Location: 391 1 3-39233 bp Feature: domain Description: HDGYP Location: 39332-39983 bp Feature: domain Description: HDGYP Location: 39332-39983 bp Feature: gene Location: 40718-40933 bp Feature: gene Location: 41346-41963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41631-41943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 631 -41 943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sensory_box (TIGR00229), PocR (pfam10114), PAS (smart00091), HDGYP (COG2206), RVT-GII

Seq: ATCT01000018.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_c26, whole genome shotgun sequence (53131 bp)
Overview 1 RT 1: 40412-44858 bp Neighborhood of RT #1 [40412, 44884] NifX_NifB RVT-GII GIIM PurR PBP2_UgpB Feature: gene Location: 40412-40735 bp Feature: domain Description: NifX_NifB Location: 40427-40724 bp Feature: domain Description: NifX_NifB Location: 4042 7-4072 4 bp Feature: gene Location: 40981-41298 bp Feature: gene Location: 41404-42012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41413-41629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41413-4162 9 bp Feature: domain Description: GIIM Note: maturase Location: 41710-41923 bp Feature: domain Description: GIIM Note: maturase Location: 41710-4192 3 bp Feature: gene Location: 42623-43609 bp Feature: domain Description: PurR Location: 42635-43604 bp Feature: domain Description: PurR Location: 42 635-43604 bp Feature: gene Location: 43637-44884 bp Feature: domain Description: PBP2_UgpB Location: 43709-44858 bp Feature: domain Description: PBP2 _UgpB Location: 43709-44858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NifX_NifB (cl00252), RVT-GII, GIIM (pfam08388), PurR (COG1609), PBP2_UgpB (cd14748)

Seq: ATCT01000036.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_c40, whole genome shotgun sequence (10612 bp)
Overview 1 RT 1: 52-2374 bp Neighborhood of RT #1 [52, 2430] RVT-GII GIIM CheY Feature: gene Location: 52-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-904 bp Feature: domain Description: GIIM Note: maturase Location: 985-1198 bp Feature: domain Description: GIIM Note: maturase Location: 985-1198 bp Feature: gene Location: 1627-1764 bp Feature: gene Location: 1990-2430 bp Feature: domain Description: CheY Location: 1996-2374 bp Feature: domain Description: CheY Location: 1996-23 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheY (COG0784), RVT-GII, GIIM (pfam08388)

Seq: ATCT01000050.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_c55, whole genome shotgun sequence (1824 bp)
Overview 1 RT 1: 3-1736 bp Neighborhood of RT #1 [3, 1822] IstB_IS21 RVT-GII GIIM Feature: gene Location: 3-491 bp Feature: domain Description: IstB_IS21 Location: 15-435 bp Feature: domain Description: IstB_IS21 Location: 15-4 35 bp Feature: gene Location: 1271-1822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-1439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274 -14 39 bp Feature: domain Description: GIIM Note: maturase Location: 1520-1736 bp Feature: domain Description: GIIM Note: maturase Location: 1520-1736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IstB_IS21 (pfam01695)

Seq: ATCT01000054.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_c6, whole genome shotgun sequence (502169 bp)
Overview 1 RT 1: 2-1415 bp Neighborhood of RT #1 [2, 1415] RVT-GII GIIM Feature: gene Location: 2-877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-5 00 bp Feature: domain Description: GIIM Note: maturase Location: 572-791 bp Feature: domain Description: GIIM Note: maturase Location: 5 72-791 bp Feature: gene Location: 917-1099 bp Feature: gene Location: 1176-1415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ATCT01000056.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_c8, whole genome shotgun sequence (137898 bp)
Overview 1 RT 1: 102843-107975 bp Neighborhood of RT #1 [102843, 108175] PRK07324 RVT-GII GIIM GltS Feature: gene Location: 102843-103964 bp Feature: domain Description: PRK07324 Location: 102846-103956 bp Feature: domain Description: PRK07324 Location: 102846 -103956 bp Feature: gene Location: 104118-104447 bp Feature: gene Location: 104819-106054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105014-105671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105014-1056 71 bp Feature: domain Description: GIIM Note: maturase Location: 105752-105965 bp Feature: domain Description: GIIM Note: maturase Location: 105752-10596 5 bp Feature: gene Location: 106523-106663 bp Feature: gene Location: 106805-108175 bp Feature: domain Description: GltS Location: 106826-107975 bp Feature: domain Description: GltS Location: 106 826 -107975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07324 (transaminase; Validated), RVT-GII, GIIM (pfam08388), GltS (COG0786)

Seq: ATCT01000063.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_rep_c590, whole genome shotgun sequence (1769 bp)
Overview 1 RT 1: 83-1513 bp Neighborhood of RT #1 [83, 1656] HEPN_AbiU2 RVT-GII Feature: gene Location: 83-556 bp Feature: domain Description: HEPN_AbiU2 Location: 185-506 bp Feature: domain Description: HEPN_AbiU2 Location: 185-506 bp Feature: gene Location: 661-1656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856-1513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HEPN_AbiU2 (pfam18734)

Seq: ATCT01000068.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_rep_c613, whole genome shotgun sequence (1360 bp)
Overview 1 RT 1: 3-1359 bp Neighborhood of RT #1 [3, 1359] RVT-GII Feature: gene Location: 3-878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198-855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198 -8 55 bp Feature: gene Location: 1228-1359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ATCT01000071.1 Mesotoga sp. Brook.08.YT.4.2.5.4. BrooK_accurate_rep_c768, whole genome shotgun sequence (1077 bp)
Overview 1 RT 1: 98-950 bp Neighborhood of RT #1 [98, 1075] RVT-GII Feature: gene Location: 98-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29 3-9 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII