myRT

myRT report for GCA_003268245.1_ASM326824v1

Download annotations/find similar RTs

Seq: QLYO01000001.1 Enterococcus faecium strain A13, whole genome shotgun sequence (2932003 bp)
Overview 1 RT 1: 357457-362263 bp 2 RT 2: 1180790-1187271 bp 3 RT 3: 1807978-1814630 bp 4 RT 4: 1912039-1917900 bp 5 RT 5: 2806213-2811253 bp Neighborhood of RT #1 [357457, 362271] dha_L_ycgS G6PD_bact RVT-GII GIIM Crp TnrB3 Neighborhood of RT #2 [1180790, 1187282] Dcm HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Neighborhood of RT #3 [1807978, 1814653] obgE GAPDH-I RVT-GII GIIM FrsA Tra8 Neighborhood of RT #4 [1912039, 1917911] PRK09362 RVT-GII GIIM Adenylsuccinate_lyase_1 PRK06019 Neighborhood of RT #5 [2806213, 2811267] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 357457-358062 bp Feature: domain Description: dha_L_ycgS Location: 357481-358039 bp Feature: domain Description: dha_L_ycgS Location: 357481 -358039 bp Feature: gene Location: 358209-358874 bp Feature: domain Description: G6PD_bact Location: 358218-358854 bp Feature: domain Description: G6PD_bact Location: 35821 8-358854 bp Feature: gene Location: 359379-360767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359700-360315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359700-36031 5 bp Feature: domain Description: GIIM Note: maturase Location: 360372-360588 bp Feature: domain Description: GIIM Note: maturase Location: 360372-360588 bp Feature: gene Location: 361056-361715 bp Feature: domain Description: Crp Location: 361107-361689 bp Feature: domain Description: Crp Location: 361 1 07-361 689 bp Feature: gene Location: 361792-362271 bp Feature: domain Description: TnrB3 Location: 361798-362263 bp Feature: domain Description: TnrB3 Location: 361 798-362263 bp Feature: gene Location: 1180790-1181932 bp Feature: domain Description: Dcm Location: 1180793-1181906 bp Feature: domain Description: Dcm Location: 1 1 80793-1 1 81 906 bp Feature: gene Location: 1182467-1183651 bp Feature: domain Description: HTH_XRE Location: 1182497-1182641 bp Feature: domain Description: HTH_XRE Location: 1 1 82497-1 1 82641 bp Feature: domain Description: Rol_Rep_N Location: 1182674-1182938 bp Feature: domain Description: Rol_Rep_N Location: 1 1 82674-1 1 82938 bp Feature: domain Description: Rep_trans Location: 1182962-1183574 bp Feature: domain Description: Rep_trans Location: 1 1 82962-1 1 83574 bp Feature: gene Location: 1184531-1186441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1184864-1185602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 84864-1 1 85602 bp Feature: domain Description: HNHc Note: nucleases Location: 1186157-1186322 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 861 57-1 1 86322 bp Feature: gene Location: 1186629-1186769 bp Feature: gene Location: 1186782-1187282 bp Feature: domain Description: ArdA Location: 1186800-1187271 bp Feature: domain Description: ArdA Location: 1 1 86800-1 1 87271 bp Feature: gene Location: 1807978-1809291 bp Feature: domain Description: obgE Location: 1807987-1809289 bp Feature: domain Description: obgE Location: 1 807987-1 809289 bp Feature: gene Location: 1809537-1810589 bp Feature: domain Description: GAPDH-I Location: 1809591-1810563 bp Feature: domain Description: GAPDH-I Location: 1 809591 -1 81 0563 bp Feature: gene Location: 1810677-1812065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1810998-1811613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 0998-1 81 1 61 3 bp Feature: domain Description: GIIM Note: maturase Location: 1811670-1811886 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 1 670-1 81 1 886 bp Feature: gene Location: 1812573-1813508 bp Feature: domain Description: FrsA Location: 1812777-1813500 bp Feature: domain Description: FrsA Location: 1 81 2777-1 81 3500 bp Feature: gene Location: 1813694-1814653 bp Feature: domain Description: Tra8 Location: 1813697-1814630 bp Feature: domain Description: Tra8 Location: 1 81 3697-1 81 4630 bp Feature: gene Location: 1912039-1912767 bp Feature: domain Description: PRK09362 Location: 1912042-1912744 bp Feature: domain Description: PRK09362 Location: 1 91 2042-1 91 2744 bp Feature: gene Location: 1913023-1913400 bp Feature: gene Location: 1913969-1915357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914290-1914905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 4290-1 91 4905 bp Feature: domain Description: GIIM Note: maturase Location: 1914962-1915178 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 4962-1 91 51 78 bp Feature: gene Location: 1915479-1916774 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1915491-1916760 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1 91 5491 -1 91 6760 bp Feature: gene Location: 1916787-1917911 bp Feature: domain Description: PRK06019 Location: 1916811-1917900 bp Feature: domain Description: PRK0601 9 Location: 1 91 681 1 -1 91 7900 bp Feature: gene Location: 2806213-2806356 bp Feature: gene Location: 2806449-2807633 bp Feature: domain Description: HTH_XRE Location: 2806479-2806623 bp Feature: domain Description: HTH_XRE Location: 2806479-2806623 bp Feature: domain Description: Rol_Rep_N Location: 2806656-2806920 bp Feature: domain Description: Rol_Rep_N Location: 2806656-2806920 bp Feature: domain Description: Rep_trans Location: 2806944-2807556 bp Feature: domain Description: Rep_trans Location: 2806944-2807556 bp Feature: gene Location: 2808513-2810423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2808846-2809584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2808846-2809584 bp Feature: domain Description: HNHc Note: nucleases Location: 2810139-2810304 bp Feature: domain Description: HNHc Note: nucleases Location: 281 01 39-281 0304 bp Feature: gene Location: 2810611-2810751 bp Feature: gene Location: 2810764-2811267 bp Feature: domain Description: ArdA Location: 2810782-2811253 bp Feature: domain Description: ArdA Location: 281 0782-281 1 253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dha_L_ycgS (TIGR02365), G6PD_bact (pfam10786), RVT-GII, GIIM (pfam08388), Crp (pfam00325), TnrB3 (COG3559), Dcm (COG0270), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)
HNHc (smart00507), ArdA (pfam07275), obgE (PRK12299), GAPDH-I (TIGR01534), FrsA (COG1073), Tra8 (COG2826), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), Adenylsuccinate_lyase_1 (cd01360), PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed)