myRT

myRT report for GCA_003268955.1_ASM326895v1

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Seq: QLTE01000019.1 Nitrosomonas sp. Nm143 Ga0207393_119, whole genome shotgun sequence (78120 bp)
Overview 1 RT 1: 4033-6554 bp Neighborhood of RT #1 [4033, 6652] RVT-GII RVT-GII bPH_4 Feature: gene Location: 4033-4185 bp Feature: gene Location: 4265-4543 bp Feature: gene Location: 4713-5093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4779-5088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4779-5088 bp Feature: gene Location: 5106-5840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5112-5466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 1 2-5466 bp Feature: gene Location: 5959-6114 bp Feature: gene Location: 6158-6652 bp Feature: domain Description: bPH_4 Location: 6338-6554 bp Feature: domain Description: bPH_4 Location: 6338-6554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, bPH_4 (pfam06713)

Seq: QLTE01000031.1 Nitrosomonas sp. Nm143 Ga0207393_131, whole genome shotgun sequence (53989 bp)
Overview 1 RT 1: 30886-37266 bp Neighborhood of RT #1 [30886, 37289] RVT-DGRs YfmG COG5635 pfam03781 Feature: gene Location: 30886-31074 bp Feature: gene Location: 31466-31594 bp Feature: gene Location: 31751-32848 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31970-32618 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31970-32 618 bp Feature: gene Location: 33049-33474 bp Feature: domain Description: YfmG Location: 33055-33160 bp Feature: domain Description: YfmG Location: 33055-33160 bp Feature: gene Location: 33630-37289 bp Feature: domain Description: COG5635 Location: 34788-35898 bp Feature: domain Description: COG5635 Location: 34788-35898 bp Feature: domain Description: pfam03781 Location: 36339-37266 bp Feature: domain Description: pfam03781 Location: 36339-372 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, YfmG (COG1262), COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: QLTE01000034.1 Nitrosomonas sp. Nm143 Ga0207393_134, whole genome shotgun sequence (46567 bp)
Overview 1 RT 1: 33616-38059 bp Neighborhood of RT #1 [33616, 38067] InsE PHA02517 RVT-GII SppA Porin_O_P Feature: gene Location: 33616-33912 bp Feature: domain Description: InsE Location: 33628-33907 bp Feature: domain Description: InsE Location: 3 3 628-3 3 907 bp Feature: gene Location: 33960-34799 bp Feature: domain Description: PHA02517 Location: 33975-34776 bp Feature: domain Description: PHA02517 Location: 3 3 975-3 4776 bp Feature: gene Location: 34824-35015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34839-35004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 483 9-3 5004 bp Feature: gene Location: 35513-36463 bp Feature: domain Description: SppA Location: 35582-36407 bp Feature: domain Description: SppA Location: 3 5582-3 6407 bp Feature: gene Location: 36586-38067 bp Feature: domain Description: Porin_O_P Location: 37033-38059 bp Feature: domain Description: Porin_O_P Location: 3 703 3 -3 8059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, SppA (COG0616), Porin_O_P (pfam07396)

Seq: QLTE01000038.1 Nitrosomonas sp. Nm143 Ga0207393_138, whole genome shotgun sequence (39261 bp)
Overview 1 RT 1: 16111-20568 bp Neighborhood of RT #1 [16111, 20568] RVT-UG7 NERD Feature: gene Location: 16111-16272 bp Feature: gene Location: 16541-17311 bp Feature: gene Location: 17301-18932 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 17730-18138 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 17730-18138 bp Feature: gene Location: 19162-19956 bp Feature: domain Description: NERD Location: 19444-19774 bp Feature: domain Description: NERD Location: 194 4 4 -19774 bp Feature: gene Location: 20434-20568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, NERD (pfam08378)