myRT

myRT report for GCA_003269355.1_ASM326935v1

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Seq: QLYV01000065.1 Pseudomonas sp. MDMC216 1915, whole genome shotgun sequence (7463 bp)
Overview 1 RT 1: 138-2733 bp Neighborhood of RT #1 [138, 2733] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 138-1871 bp Feature: RT Description: RVT_N Location: 198-441 bp Feature: RT Description: RVT_N Location: 1 98-441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489-1 1 40 bp Feature: domain Description: GIIM Note: maturase Location: 1218-1446 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 8-1 446 bp Feature: domain Description: HNHc Note: nucleases Location: 1674-1830 bp Feature: domain Description: HNHc Note: nucleases Location: 1 674-1 830 bp Feature: gene Location: 2046-2174 bp Feature: gene Location: 2485-2733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: QLYV01000073.1 Pseudomonas sp. MDMC216 1926, whole genome shotgun sequence (50903 bp)
Overview 1 RT 1: 46236-49751 bp Neighborhood of RT #1 [46236, 49792] dut PRK05579 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 46236-46691 bp Feature: domain Description: dut Location: 46242-46686 bp Feature: domain Description: dut Location: 462 42 -46686 bp Feature: gene Location: 46694-47902 bp Feature: domain Description: PRK05579 Location: 46700-47894 bp Feature: domain Description: PRK05579 Location: 46700-47894 bp Feature: gene Location: 48110-49792 bp Feature: RT Description: RVT_N Location: 48119-48362 bp Feature: RT Description: RVT_N Location: 48119-48362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48410-49061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48410-49061 bp Feature: domain Description: GIIM Note: maturase Location: 49139-49367 bp Feature: domain Description: GIIM Note: maturase Location: 49139-49367 bp Feature: domain Description: HNHc Note: nucleases Location: 49595-49751 bp Feature: domain Description: HNHc Note: nucleases Location: 49595-49751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: QLYV01000075.1 Pseudomonas sp. MDMC216 1928, whole genome shotgun sequence (31869 bp)
Overview 1 RT 1: 2-3229 bp Neighborhood of RT #1 [2, 3229] DUF772 RVT-GII GIIM Feature: gene Location: 2-661 bp Feature: domain Description: DUF772 Location: 170-365 bp Feature: domain Description: DUF772 Location: 170-3 65 bp Feature: gene Location: 1050-2318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1263-1920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1263 -1920 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2220 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2220 bp Feature: gene Location: 2468-2866 bp Feature: gene Location: 3050-3229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)

Seq: QLYV01000117.1 Pseudomonas sp. MDMC216 1980, whole genome shotgun sequence (47599 bp)
Overview 1 RT 1: 758-5029 bp Neighborhood of RT #1 [758, 5029] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 758-886 bp Feature: gene Location: 1061-2794 bp Feature: RT Description: RVT_N Location: 1121-1364 bp Feature: RT Description: RVT_N Location: 1121-1364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1412-2063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 12-2063 bp Feature: domain Description: GIIM Note: maturase Location: 2141-2369 bp Feature: domain Description: GIIM Note: maturase Location: 214 1-2369 bp Feature: domain Description: HNHc Note: nucleases Location: 2597-2753 bp Feature: domain Description: HNHc Note: nucleases Location: 2597-2753 bp Feature: gene Location: 2911-3873 bp Feature: gene Location: 3878-5029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)