myRT

myRT report for GCA_003284485.1_ASM328448v1

Download annotations/find similar RTs

Seq: PUFY01000047.1 Escherichia coli strain E12 NODE_47_length_14481_cov_41.595056, whole genome shotgun sequence (14481 bp)
Overview 1 RT 1: 597-4423 bp Neighborhood of RT #1 [597, 4452] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc HTH_23 InsE TnpB_IS66 Feature: gene Location: 597-830 bp Feature: domain Description: DUF905 Location: 627-825 bp Feature: domain Description: DUF905 Location: 627-825 bp Feature: gene Location: 888-1328 bp Feature: domain Description: PRK13732 Location: 894-1326 bp Feature: domain Description: PRK1 3732 Location: 894-1 326 bp Feature: gene Location: 1523-3466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1832-2663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 832-2663 bp Feature: domain Description: Intron_maturas2 Location: 2777-3035 bp Feature: domain Description: Intron_maturas2 Location: 2777-3035 bp Feature: domain Description: HNHc Note: nucleases Location: 3209-3371 bp Feature: domain Description: HNHc Note: nucleases Location: 3209-3371 bp Feature: gene Location: 3458-4105 bp Feature: domain Description: HTH_23 Location: 3488-3599 bp Feature: domain Description: HTH_23 Location: 3488-3599 bp Feature: domain Description: InsE Location: 3731-4085 bp Feature: domain Description: InsE Location: 3731 -4085 bp Feature: gene Location: 4105-4452 bp Feature: domain Description: TnpB_IS66 Location: 4132-4423 bp Feature: domain Description: TnpB_IS66 Location: 41 32-4423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_23 (pfam13384), InsE (COG2963), TnpB_IS66 (pfam05717), DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional)

Seq: PUFY01000052.1 Escherichia coli strain E12 NODE_52_length_9688_cov_24.013066, whole genome shotgun sequence (9688 bp)
Overview 1 RT 1: 6996-9569 bp Neighborhood of RT #1 [6996, 9685] DDE_Tnp_1_5 RVT-GII Feature: gene Location: 6996-7151 bp Feature: gene Location: 7176-8099 bp Feature: domain Description: DDE_Tnp_1_5 Location: 7233-7566 bp Feature: domain Description: DDE_Tnp_1_5 Location: 72 33-7566 bp Feature: gene Location: 8564-9685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8837-9569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8837-9569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), RVT-GII