myRT

myRT report for GCA_003285205.1_ASM328520v1

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Seq: CP016181.1 Marinomonas primoryensis strain AceL chromosome (4585666 bp)
Overview 1 RT 1: 258927-263813 bp 2 RT 2: 3077089-3081863 bp 3 RT 3: 3781273-3786847 bp Neighborhood of RT #1 [258927, 263821] COG3950 RVT-Retrons RhaT ansA Neighborhood of RT #2 [3077089, 3081863] InsE PAS_3 Tar RVT-GII IS5 Neighborhood of RT #3 [3781273, 3786847] HigB-like_toxin COG3561 RVT-Retrons TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-Retrons Feature: gene Location: 258927-259061 bp Feature: gene Location: 259115-260770 bp Feature: domain Description: COG3950 Location: 259316-260744 bp Feature: domain Description: COG3950 Location: 25931 6-260744 bp Feature: gene Location: 260767-261696 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 260869-261463 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 260869-261 463 bp Feature: gene Location: 261922-262788 bp Feature: domain Description: RhaT Location: 261931-262771 bp Feature: domain Description: RhaT Location: 261 931 -262771 bp Feature: gene Location: 262841-263821 bp Feature: domain Description: ansA Location: 262847-263813 bp Feature: domain Description: ansA Location: 262847-26381 3 bp Feature: gene Location: 3077089-3077382 bp Feature: domain Description: InsE Location: 3077101-3077371 bp Feature: domain Description: InsE Location: 30771 01 -3077371 bp Feature: gene Location: 3077472-3079052 bp Feature: domain Description: PAS_3 Location: 3077565-3077778 bp Feature: domain Description: PAS_3 Location: 3077565-3077778 bp Feature: domain Description: Tar Location: 3077970-3079032 bp Feature: domain Description: Tar Location: 3077970-3079032 bp Feature: gene Location: 3079421-3080500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3079430-3080123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3079430-30801 23 bp Feature: gene Location: 3080585-3081547 bp Feature: domain Description: IS5 Location: 3080777-3081539 bp Feature: domain Description: IS5 Location: 3080777-3081 539 bp Feature: gene Location: 3081708-3081863 bp Feature: gene Location: 3781273-3781551 bp Feature: domain Description: HigB-like_toxin Location: 3781282-3781549 bp Feature: domain Description: HigB-like_toxin Location: 3781 282-3781 549 bp Feature: gene Location: 3781739-3782038 bp Feature: domain Description: COG3561 Location: 3781742-3781865 bp Feature: domain Description: COG3561 Location: 3781 742-3781 865 bp Feature: gene Location: 3783002-3783541 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3783131-3783506 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37831 31 -3783506 bp Feature: gene Location: 3783618-3783953 bp Feature: gene Location: 3783994-3784296 bp Feature: domain Description: TnpB_IS66 Location: 3783997-3784249 bp Feature: domain Description: TnpB_IS66 Location: 3783997-3784249 bp Feature: gene Location: 3784316-3785899 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3784436-3784661 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3784436-3784661 bp Feature: domain Description: zf-IS66 Location: 3784691-3784820 bp Feature: domain Description: zf-IS66 Location: 3784691 -3784820 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3784865-3785732 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3784865-3785732 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3785753-3785867 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3785753-3785867 bp Feature: gene Location: 3785911-3786135 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3785950-3786034 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3785950-3786034 bp Feature: gene Location: 3786154-3786303 bp Feature: gene Location: 3786344-3786847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, RhaT (TIGR00776), ansA (PRK09461), InsE (COG2963), PAS_3 (pfam08447), Tar (COG0840), RVT-GII, IS5 (COG3039), HigB-like_toxin (pfam05015)
COG3561 (Phage anti-repressor protein ), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)