myRT

myRT report for GCA_003287405.1_ASM328740v1

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Seq: PRLD01000019.1 Faecalibacterium prausnitzii strain APC923/51-1 NODE_19_length_31961_cov_775.81, whole genome shotgun sequence (31961 bp)
Overview 1 RT 1: 4954-7799 bp Neighborhood of RT #1 [4954, 8437] HTH_XRE RVT-Retrons Relaxase Feature: gene Location: 4954-5145 bp Feature: gene Location: 5248-5553 bp Feature: domain Description: HTH_XRE Location: 5257-5422 bp Feature: domain Description: HTH_XRE Location: 5257-5422 bp Feature: gene Location: 5543-6577 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5702-6236 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5702-6236 bp Feature: gene Location: 6842-7222 bp Feature: gene Location: 7289-8437 bp Feature: domain Description: Relaxase Location: 7394-7799 bp Feature: domain Description: Relaxase Location: 7394-7799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, Relaxase (pfam03432)

Seq: PRLD01000001.1 Faecalibacterium prausnitzii strain APC923/51-1 NODE_1_length_476007_cov_631.215, whole genome shotgun sequence (476007 bp)
Overview 1 RT 1: 189134-191426 bp 2 RT 2: 410061-422986 bp Neighborhood of RT #1 [189134, 191426] RVT-DGRs Neighborhood of RT #2 [410061, 423027] Spo0A_C MutS_I YtxK COG4646 RVT-GII HNHc COG4646 HepA MobC Feature: gene Location: 189134-189289 bp Feature: gene Location: 189446-189778 bp Feature: gene Location: 189775-191019 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 190075-190666 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 190075-190666 bp Feature: gene Location: 191045-191230 bp Feature: gene Location: 191253-191426 bp Feature: gene Location: 410061-410285 bp Feature: domain Description: Spo0A_C Location: 410073-410265 bp Feature: domain Description: Spo0A_C Location: 410073-4102 65 bp Feature: gene Location: 410364-417461 bp Feature: domain Description: MutS_I Location: 414474-414624 bp Feature: domain Description: MutS_I Location: 414474-41462 4 bp Feature: domain Description: YtxK Location: 415137-415860 bp Feature: domain Description: YtxK Location: 415137-415860 bp Feature: domain Description: COG4646 Location: 415932-417453 bp Feature: domain Description: COG4646 Location: 415932 -417453 bp Feature: gene Location: 418194-420077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418512-419241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418512 -4192 41 bp Feature: domain Description: HNHc Note: nucleases Location: 419793-419961 bp Feature: domain Description: HNHc Note: nucleases Location: 419793-419961 bp Feature: gene Location: 420263-422689 bp Feature: domain Description: COG4646 Location: 420266-421310 bp Feature: domain Description: COG4646 Location: 42 02 66-42 1310 bp Feature: domain Description: HepA Location: 421583-421853 bp Feature: domain Description: HepA Location: 42 1583-42 1853 bp Feature: gene Location: 422689-423027 bp Feature: domain Description: MobC Location: 422878-422986 bp Feature: domain Description: MobC Location: 42 2 878-42 2 986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Spo0A_C (pfam08769), MutS_I (pfam01624), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, HNHc (smart00507), HepA (COG0553), MobC (pfam05713)