myRT

myRT report for GCA_003289775.1_ASM328977v1

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Seq: QMDD01000172.1 Enterobacter hormaechei subsp. xiangfangensis strain 100A9 100A9-redeposit_S69_R1__paired__contig_172, whole genome shotgun sequence (4037 bp)
Overview 1 RT 1: 1-3969 bp Neighborhood of RT #1 [1, 4034] AcrR PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1-570 bp Feature: domain Description: AcrR Location: 7-475 bp Feature: domain Description: AcrR Location: 7-475 bp Feature: gene Location: 817-1263 bp Feature: domain Description: PHA02517 Location: 820-1261 bp Feature: domain Description: PHA0251 7 Location: 820-1 261 bp Feature: gene Location: 1380-2903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1653-2385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 653-2385 bp Feature: domain Description: GIIM Note: maturase Location: 2460-2658 bp Feature: domain Description: GIIM Note: maturase Location: 2460-2658 bp Feature: gene Location: 2857-3282 bp Feature: gene Location: 3495-4034 bp Feature: domain Description: PHA02517 Location: 3615-3969 bp Feature: domain Description: PHA0251 7 Location: 361 5-3969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AcrR (COG1309), PHA02517 (putative transposase OrfB; Reviewed)

Seq: QMDD01000029.1 Enterobacter hormaechei subsp. xiangfangensis strain 100A9 100A9-redeposit_S69_R1__paired__contig_29, whole genome shotgun sequence (45820 bp)
Overview 1 RT 1: 20981-24310 bp Neighborhood of RT #1 [20981, 24310] Q DUF2188 RVT-Retrons HTH_XRE Feature: gene Location: 20981-22003 bp Feature: domain Description: Q Location: 20984-21998 bp Feature: domain Description: Q Location: 2 0984-2 1998 bp Feature: gene Location: 22038-22262 bp Feature: domain Description: DUF2188 Location: 22050-22227 bp Feature: domain Description: DUF2 188 Location: 2 2 050-2 2 2 2 7 bp Feature: gene Location: 22710-23660 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22890-23430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 890-2 3430 bp Feature: gene Location: 23638-23946 bp Feature: domain Description: HTH_XRE Location: 23650-23815 bp Feature: domain Description: HTH_XRE Location: 2 3650-2 3815 bp Feature: gene Location: 23984-24310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), DUF2188 (pfam09954), RVT-Retrons, HTH_XRE (smart00530)