myRT

myRT report for GCA_003290695.1_ASM329069v1

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Seq: PJFR01000017.1 Escherichia coli strain 2142 NODE_17_length_105856_cov_106.197, whole genome shotgun sequence (105856 bp)
Overview 1 RT 1: 91155-95447 bp Neighborhood of RT #1 [91155, 95608] cbl RVT-UG12 Phage_int_SAM_2 Integrase_1 Feature: gene Location: 91155-92105 bp Feature: domain Description: cbl Location: 91158-92103 bp Feature: domain Description: cbl Location: 91 1 58-921 03 bp Feature: gene Location: 92423-92641 bp Feature: gene Location: 92833-94128 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 93184-93619 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 931 84-9361 9 bp Feature: gene Location: 94125-94388 bp Feature: gene Location: 94697-95608 bp Feature: domain Description: Phage_int_SAM_2 Location: 94700-94970 bp Feature: domain Description: Phage_int_SAM_2 Location: 94700-94970 bp Feature: domain Description: Integrase_1 Location: 95003-95447 bp Feature: domain Description: Integrase_1 Location: 95003-95447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cbl (PRK12679), RVT-UG12, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835)

Seq: PJFR01000074.1 Escherichia coli strain 2142 NODE_74_length_4127_cov_20.0314, whole genome shotgun sequence (3836 bp)
Overview 1 RT 1: 1428-3835 bp Neighborhood of RT #1 [1428, 3835] RVT-Retrons CspC Feature: gene Location: 1428-1652 bp Feature: gene Location: 1891-2073 bp Feature: gene Location: 2095-3234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2239-2794 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 39-2 794 bp Feature: gene Location: 3239-3442 bp Feature: domain Description: CspC Location: 3242-3437 bp Feature: domain Description: CspC Location: 32 42 -3437 bp Feature: gene Location: 3641-3835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)