myRT

myRT report for GCA_003291255.1_ASM329125v1

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Seq: PJHQ01000011.1 Escherichia coli strain 3759 NODE_11_length_132667_cov_129.513, whole genome shotgun sequence (132667 bp)
Overview 1 RT 1: 115490-123095 bp Neighborhood of RT #1 [115490, 123100] DinI KAP_NTPase RVT-Retrons Q P Feature: gene Location: 115490-115723 bp Feature: domain Description: DinI Location: 115532-115718 bp Feature: domain Description: DinI Location: 1 1 5532-1 1 571 8 bp Feature: gene Location: 116052-117944 bp Feature: domain Description: KAP_NTPase Location: 116067-116703 bp Feature: domain Description: KAP_NTPase Location: 1 1 6067-1 1 6703 bp Feature: gene Location: 118496-120253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118640-119261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 8640-1 1 9261 bp Feature: gene Location: 120303-121334 bp Feature: domain Description: Q Location: 120306-121329 bp Feature: domain Description: Q Location: 1 20306-1 21 329 bp Feature: gene Location: 121334-123100 bp Feature: domain Description: P Location: 121361-123095 bp Feature: domain Description: P Location: 1 21 361 -1 23095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), KAP_NTPase (pfam07693), RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: PJHQ01000001.1 Escherichia coli strain 3759 NODE_1_length_539171_cov_128.446, whole genome shotgun sequence (539171 bp)
Overview 1 RT 1: 168542-175055 bp Neighborhood of RT #1 [168542, 175276] AAA_21 RVT-Retrons Caudo_TAP COG5301 COG5301 Feature: gene Location: 168542-168697 bp Feature: gene Location: 169212-171227 bp Feature: domain Description: AAA_21 Location: 169353-169992 bp Feature: domain Description: AAA_2 1 Location: 169353-169992 bp Feature: gene Location: 171348-172445 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 171516-172062 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 171516-172 062 bp Feature: gene Location: 172868-173395 bp Feature: domain Description: Caudo_TAP Location: 172988-173393 bp Feature: domain Description: Caudo_TAP Location: 172 988-173393 bp Feature: gene Location: 173399-175276 bp Feature: domain Description: COG5301 Location: 173402-174293 bp Feature: domain Description: COG5301 Location: 173402 -1742 93 bp Feature: domain Description: COG5301 Location: 174629-175055 bp Feature: domain Description: COG5301 Location: 17462 9-175055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons, Caudo_TAP (pfam02413), COG5301 (Phage-related tail fibre protein )