myRT

myRT report for GCA_003291585.1_ASM329158v1

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Seq: PJFZ01000043.1 Escherichia coli strain 3039 NODE_43_length_38451_cov_141.394, whole genome shotgun sequence (38451 bp)
Overview 1 RT 1: 44-7936 bp Neighborhood of RT #1 [44, 7947] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 44-247 bp Feature: gene Location: 486-2504 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1056-1506 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 056-1 506 bp Feature: gene Location: 3760-5220 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4135-4342 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 41 35-4342 bp Feature: domain Description: INT_P4_C Location: 4561-5098 bp Feature: domain Description: INT_P4_C Location: 4561 -5098 bp Feature: gene Location: 5365-7947 bp Feature: domain Description: mutS1 Location: 5416-7936 bp Feature: domain Description: mutS1 Location: 541 6-7936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)

Seq: PJFZ01000095.1 Escherichia coli strain 3039 NODE_95_length_2686_cov_61.1391, whole genome shotgun sequence (2686 bp)
Overview 1 RT 1: 599-2317 bp Neighborhood of RT #1 [599, 2562] RVT-GII GIIM Feature: gene Location: 599-742 bp Feature: gene Location: 767-952 bp Feature: gene Location: 1039-2562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1312-2044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1312 -2 044 bp Feature: domain Description: GIIM Note: maturase Location: 2119-2317 bp Feature: domain Description: GIIM Note: maturase Location: 2 119-2 317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PJFZ01000096.1 Escherichia coli strain 3039 NODE_96_length_2666_cov_143.301, whole genome shotgun sequence (2666 bp)
Overview 1 RT 1: 250-2297 bp Neighborhood of RT #1 [250, 2542] PHA02517 RVT-GII GIIM Feature: gene Location: 250-429 bp Feature: gene Location: 450-890 bp Feature: domain Description: PHA02517 Location: 453-861 bp Feature: domain Description: PHA02517 Location: 453 -861 bp Feature: gene Location: 1019-2542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1292-2024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1292-2024 bp Feature: domain Description: GIIM Note: maturase Location: 2099-2297 bp Feature: domain Description: GIIM Note: maturase Location: 2099-2297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)