myRT

myRT report for GCA_003291735.1_ASM329173v1

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Seq: PJGQ01000021.1 Escherichia coli strain 1375 NODE_21_length_74008_cov_141.509, whole genome shotgun sequence (74008 bp)
Overview 1 RT 1: 52502-55718 bp Neighborhood of RT #1 [52502, 56530] HTH_XRE RVT-Retrons RVT-Retrons MobA_MobL Feature: gene Location: 52502-52717 bp Feature: gene Location: 52808-53089 bp Feature: domain Description: HTH_XRE Location: 52823-52988 bp Feature: domain Description: HTH_XRE Location: 52823-52988 bp Feature: gene Location: 53082-53450 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53223-53427 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53223-53427 bp Feature: gene Location: 53467-54183 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53470-53779 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53470-53779 bp Feature: gene Location: 54402-55052 bp Feature: gene Location: 55130-56530 bp Feature: domain Description: MobA_MobL Location: 55181-55718 bp Feature: domain Description: MobA_MobL Location: 551 81 -5571 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, MobA_MobL (pfam03389)

Seq: PJGQ01000003.1 Escherichia coli strain 1375 NODE_3_length_277045_cov_140.719, whole genome shotgun sequence (277045 bp)
Overview 1 RT 1: 149689-159262 bp Neighborhood of RT #1 [149689, 159276] Phage_GPA RVT-AbiP2 RVT-Retrons Q P Feature: gene Location: 149689-151965 bp Feature: domain Description: Phage_GPA Location: 150088-151075 bp Feature: domain Description: Phage_GPA Location: 150088-151075 bp Feature: gene Location: 152027-152287 bp Feature: gene Location: 152453-153997 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 152870-153323 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 152 870-15332 3 bp Feature: gene Location: 154548-155738 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 154698-155280 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 154698-1552 80 bp Feature: gene Location: 156485-157504 bp Feature: domain Description: Q Location: 156488-157499 bp Feature: domain Description: Q Location: 156488-157499 bp Feature: gene Location: 157504-159276 bp Feature: domain Description: P Location: 157531-159262 bp Feature: domain Description: P Location: 157531-1592 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536), P (PHA02535)