myRT

myRT report for GCA_003291855.1_ASM329185v1

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Seq: PJGY01000001.1 Escherichia coli strain HU4 NODE_1_length_245971_cov_101.709, whole genome shotgun sequence (245971 bp)
Overview 1 RT 1: 235149-240027 bp Neighborhood of RT #1 [235149, 240029] umuC PRK10276 RVT-GII hlyE Feature: gene Location: 235149-236417 bp Feature: domain Description: umuC Location: 235152-236415 bp Feature: domain Description: umuC Location: 2351 52-23641 5 bp Feature: gene Location: 236417-236836 bp Feature: domain Description: PRK10276 Location: 236420-236834 bp Feature: domain Description: PRK1 0276 Location: 236420-236834 bp Feature: gene Location: 236915-238402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237320-238010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237320-23801 0 bp Feature: gene Location: 238427-238813 bp Feature: gene Location: 239112-240029 bp Feature: domain Description: hlyE Location: 239121-240027 bp Feature: domain Description: hlyE Location: 2391 21 -240027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, hlyE (PRK11376)

Seq: PJGY01000033.1 Escherichia coli strain HU4 NODE_33_length_53912_cov_100.194, whole genome shotgun sequence (53912 bp)
Overview 1 RT 1: 3-8074 bp Neighborhood of RT #1 [3, 8085] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 3-197 bp Feature: gene Location: 624-2642 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1194-1644 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1194-1644 bp Feature: gene Location: 3898-5358 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4273-4480 bp Feature: domain Description: INT_Rci_Hp1_C Location: 42 73-4480 bp Feature: domain Description: INT_P4_C Location: 4699-5236 bp Feature: domain Description: INT_P4_C Location: 4699-52 36 bp Feature: gene Location: 5503-8085 bp Feature: domain Description: mutS1 Location: 5554-8074 bp Feature: domain Description: mutS1 Location: 5554-8074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)