myRT

myRT report for GCA_003291975.1_ASM329197v1

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Seq: PJHO01000051.1 Escherichia coli strain HEB2 NODE_51_length_32084_cov_181.855, whole genome shotgun sequence (32084 bp)
Overview 1 RT 1: 3160-6588 bp Neighborhood of RT #1 [3160, 6605] PinE PRiA4_ORF3 RVT-GII PRK10276 Feature: gene Location: 3160-3732 bp Feature: domain Description: PinE Location: 3166-3706 bp Feature: domain Description: PinE Location: 31 66-3706 bp Feature: gene Location: 3869-4459 bp Feature: domain Description: PRiA4_ORF3 Location: 3875-4370 bp Feature: domain Description: PRiA4_ORF3 Location: 3875-4370 bp Feature: gene Location: 4542-5291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4548-5160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4548-51 60 bp Feature: gene Location: 5266-5868 bp Feature: gene Location: 5922-6605 bp Feature: domain Description: PRK10276 Location: 6225-6588 bp Feature: domain Description: PRK1 0276 Location: 6225-6588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PRiA4_ORF3 (pfam07929), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: PJHO01000006.1 Escherichia coli strain HEB2 NODE_6_length_134168_cov_95.0515, whole genome shotgun sequence (134168 bp)
Overview 1 RT 1: 118488-120928 bp Neighborhood of RT #1 [118488, 120928] HTH_XRE RVT-Retrons Feature: gene Location: 118488-118901 bp Feature: gene Location: 118938-119246 bp Feature: domain Description: HTH_XRE Location: 118950-119115 bp Feature: domain Description: HTH_XRE Location: 118950-119115 bp Feature: gene Location: 119224-120174 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 119404-119947 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 119404-119947 bp Feature: gene Location: 120298-120735 bp Feature: gene Location: 120797-120928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons